Pairwise Alignments

Query, 282 a.a., Protein involved in catabolism of external DNA from Pseudomonas stutzeri RCH2

Subject, 280 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ from Erwinia amylovora T8

 Score =  259 bits (661), Expect = 6e-74
 Identities = 122/279 (43%), Positives = 178/279 (63%), Gaps = 1/279 (0%)

Query: 1   MNYRHAFHAGNHADVLKHLVLSRIFALLSRKEAPFAYLDSHAGVGLYDLAGDQASRTGEW 60
           ++YRH+FHAGNHADVLKH V S I + L+ K+ P+ YLD+HAG G Y L+G+ A RTGE+
Sbjct: 2   LSYRHSFHAGNHADVLKHTVQSLIISALNEKDKPYLYLDTHAGAGRYQLSGEHAERTGEY 61

Query: 61  LQGIARIWQAEAQPALLDDYLGVIRELNPDGALRYYPGSPELARQLTREQDRLQLNEKHP 120
           L+GIARIWQ +  P  L  Y+GV++ LNP G LRYYPGSP +AR L RE D+LQL E H 
Sbjct: 62  LEGIARIWQQDNIPEELSAYIGVVKNLNPGGKLRYYPGSPLIARFLLREFDKLQLTELHS 121

Query: 121 EDGALLKDNMAGDRRVAVHRGEGWFVPRALMPTQEKRVVLLIDPPFEQADELSRCVTAIK 180
            D  LL++    D R    R +G+   ++ +P   +R ++LIDPP+E   +    V  I+
Sbjct: 122 SDFPLLRNEFLKDDRARTERADGYQQLKSKLPPPSRRGLILIDPPYEMKSDYQDVVKGIQ 181

Query: 181 EALGRMRQTIGVIWYPIKDERQLKRFYQDLARSGAPKLLRAELFVHPADDSSRLSGSGLA 240
           E   R    +  +WYP+   +Q+KR   +L  +G  ++L+ EL V P  D   ++ SG+ 
Sbjct: 182 EGYKRFSTGVFALWYPVVLRQQIKRMCNELEATGIRRILQIELAVRPDSDQRGMTASGMI 241

Query: 241 IVNPPWGLEEELRELLPWLAEQLAQS-QGSWRLDWLIEE 278
           ++NPPW LE++++ +LPWL + L  +  G  R+ W++ E
Sbjct: 242 VINPPWKLEQQMKNVLPWLHKTLVPAGTGHTRVSWIVPE 280