Pairwise Alignments

Query, 587 a.a., alpha-ketoglutarate sensor protein (mifS) (from data) from Pseudomonas stutzeri RCH2

Subject, 585 a.a., C4-dicarboxylate transport sensor protein from Pseudomonas putida KT2440

 Score =  568 bits (1465), Expect = e-166
 Identities = 305/578 (52%), Positives = 397/578 (68%), Gaps = 1/578 (0%)

Query: 1   MPALPNRLRVTLIVALILVGLLLSMHWAGRLAEQRAWAERSQESQGQLELYAQAIHTQVE 60
           MP     LR+ LI  LI++G  LS  WA   A+++A  + ++ +  QL LYA A+HT ++
Sbjct: 1   MPFSFRALRLGLITLLIVLGTALSAGWAMHQAKRQAMEDDAKRASQQLGLYANALHTLID 60

Query: 61  RFRSVPALLALDSDIQGLLADPGNRALRRELNQRLEQQNHAAGSSVLYLLDRNGETIAAS 120
           R+R++PA+LALD ++   L  P +  ++  LN +LE+ N AA SS L LLDR G  IAAS
Sbjct: 61  RYRALPAVLALDPELIAALRGPVDEKVQNALNLKLERINGAANSSTLELLDRTGLAIAAS 120

Query: 121 NWRDWSSFVGNNYAFRPYFRDAVAHDSGRYFAVGVTTGIPGYFLSSSVKSATGEVLGVLV 180
           NWR  SS+VG+NY FRPYF+   +  SGR++AVGVT+G+PGYFL+S+V    G  LG +V
Sbjct: 121 NWRLPSSYVGSNYGFRPYFKQTRSQGSGRFYAVGVTSGVPGYFLASAVNDEHGRFLGAMV 180

Query: 181 VKLELEDMQRDWVGQPGILLIADSLDIVILTNRPAWRFRYLRPLSDEVRSRLIDVRRYAE 240
           VKLE  +++R+W     ILL++D+  I  + N+  WR+R L+PLS   R+ L + R+Y +
Sbjct: 181 VKLEFPELEREWRQGNDILLVSDARGITFIANQDGWRYRELQPLSGADRADLAETRQYDK 240

Query: 241 QTLQPLQSSRVQQLSESSERRLVDGPDGRREYLWQRLALPEEDWTLHLLHDPQMVVASVR 300
           Q L PL    + + +  S    V GP+G  EYLW+ L L  E+WTLHLL  PQ V A  R
Sbjct: 241 QPLVPLHHQVLTRFAPYSTLSRVQGPEGSTEYLWESLPLEGENWTLHLLRKPQ-VAADGR 299

Query: 301 SYRLAAAGVWMTLAFLLLYLAQRRKTRRVEMRSRSELEHLVHERTRELHTAQDELVHAAR 360
           +  L AA VW++L F  L+++QR +  R+  RSR ELE  V ERTREL TAQ+ LV +A+
Sbjct: 300 NAALGAAAVWLSLVFAALFVSQRLRLARLRQRSRQELERQVEERTRELRTAQEGLVQSAK 359

Query: 361 MAALGQMSAALAHEINQPLTALRMQLASLRLLLDSGRDGEVREGLGHVEGLLERMAALTG 420
           +AALGQMSAA+AHEINQPLT  RMQL +LRLLLD GR  E R+ L  +E +L RMAALT 
Sbjct: 360 LAALGQMSAAMAHEINQPLTTQRMQLETLRLLLDHGRHDEARQALEPLEQMLTRMAALTS 419

Query: 421 HLKTFARKSPAGLRQRLSLAEVLEQALQLLSPRIRSEQVEVFRQVPAEAMVSGDAIRLEQ 480
           HLKTFAR SP GLR+RL LA V++QAL LL  R+R+E+VEV   +   A V GDAIRLEQ
Sbjct: 420 HLKTFARNSPMGLRERLDLATVVDQALHLLEARLRNEEVEVALYLARPAWVRGDAIRLEQ 479

Query: 481 VLINLLHNALDAMAGRPQRRLRILCQLNGDSWQLSVGDNGGGIASEHLDQVFEPFFTTKP 540
           VLINLLHNALDAM  +  +RL I  + + D W+LSV D+GGGIA   L +VF+PFFTTKP
Sbjct: 480 VLINLLHNALDAMLDKRYKRLEIRIEPDEDLWRLSVLDSGGGIAEADLAKVFDPFFTTKP 539

Query: 541 VGQGLGLGLAVSYGIVRDMGGTLEVSNDAHGAVFTLTL 578
           VG+GLGLGLA+SYGIV + GG L   N   GA  +LTL
Sbjct: 540 VGEGLGLGLAISYGIVHEAGGQLRAENLPGGARLSLTL 577