Pairwise Alignments

Query, 404 a.a., uncharacterized domain HDIG from Pseudomonas stutzeri RCH2

Subject, 429 a.a., HD-GYP domain from Pseudomonas stutzeri RCH2

 Score =  194 bits (494), Expect = 3e-54
 Identities = 121/358 (33%), Positives = 185/358 (51%), Gaps = 17/358 (4%)

Query: 3   RKVLVSQLRFGMYVHALEGSWFDHPFWRSKFLLTDPADLQALHASGIKAVWIDAGRGVDV 62
           R+V V+ L  GMYV  L+  W +  F    F L  P +++ +  S    V++D  R V +
Sbjct: 20  RRVAVASLELGMYVCELDRPWSETNFAFQGFPLLTPGEIRKVR-SCCDYVYVDDTRRVRL 78

Query: 63  ETATPPAAEAPLLGADTIPVVSISVTPPTQQC--SAREEMQRATALLKRSREQVTLLFNE 120
           +   P A   P                P ++   +   E++ A +  +   + +  +  +
Sbjct: 79  QHGVPVATATP------------RARKPQERTYHALSTEVEEARSAYQDGSQLIEQVLAD 126

Query: 121 ARLGKAVDPQQCQPLVEQISASLARNGSALLSLARLKTKDEYTYMHSVAVCALMVALARQ 180
            + G+ +D + C   V++   S+ RN SA+L L RLK KD YT +H ++V  + +     
Sbjct: 127 VQHGRVIDTRACHGAVKRNLESMLRNESAMLWLIRLKNKDLYTSLHCLSVSIMAMGFGNH 186

Query: 181 LGLPEDQVHEAGMAGLLHDIGKMAMPLDVLNKPGKLSDDEYMVMRSHPERGHAMLLAAQT 240
           LGL +D++   GMAGLLHD+GKM +   +LNKPGKL+  E+ V++ HP  G    L AQ 
Sbjct: 187 LGLQDDKLQLLGMAGLLHDVGKMRIDPQILNKPGKLTSQEFEVIKRHPVFG-LEALRAQP 245

Query: 241 AVSDAVLDVCLHHHEKVNGTGYPHRLEGEQISRLARMGAICDVYDAITSNRPYKTAWDAS 300
            V +A L     HHE+++GTGYP      QIS + R+  I D +DAITS+R Y  A    
Sbjct: 246 GVPEAALHAAYGHHERLDGTGYPLGSGPAQISYMTRIITIVDAFDAITSHRAYDCARPVQ 305

Query: 301 GSLARMAQWHG-HFDTQLLHAFVRTVGIYPLGSLVRLQSGRLGVVTEHHPQQLTAPRV 357
            +   +    G  FD  L+  F+R +G +P+G+LV L +G + VV E H Q    PRV
Sbjct: 306 AAFEILRSGSGRQFDEDLVLEFIRWLGAFPVGTLVELHTGEVAVVVEKHKQFQLRPRV 363