Pairwise Alignments

Query, 370 a.a., recF protein from Pseudomonas stutzeri RCH2

Subject, 357 a.a., DNA recombination and repair protein RecF from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  262 bits (669), Expect = 1e-74
 Identities = 145/360 (40%), Positives = 208/360 (57%), Gaps = 4/360 (1%)

Query: 1   MSLSRLSVTGVRNLHPVTLSPCPRINILFGDNGSGKTSLLEAIHLLGLARSFRSIRLNPV 60
           MSL+RL +   RN+    L+  P  N L G NGSGKTS+LEAI+ LG  R+FRS++   V
Sbjct: 1   MSLTRLLIKDFRNIENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQPGRV 60

Query: 61  ITYEQSACTVFGQVELPDQHSRALGVARDRSGEVRIRIDGQSVRSAAELADTLPLQLINP 120
           I +EQ A  + G+++  ++   ++G+ +D+ G+ ++RIDG      AELA  +P+QLI P
Sbjct: 61  IRHEQEAFVLHGRLQ-SEERETSIGLTKDKQGDSKVRIDGTDGHKIAELAHLMPMQLITP 119

Query: 121 DSFRLLEGAPKLRRQFLDWGVFHVEHRFMAAWQRLQQALRQRNSWLRHGTLDGASNAAWS 180
           + F LL G PK RR FLDWG FH E  F  AW  L++ L+QRN+ LR  +        W 
Sbjct: 120 EGFTLLNGGPKYRRAFLDWGCFHNEAGFFTAWSNLKRLLKQRNAALRQVSRYEQLRP-WD 178

Query: 181 RELTLASDEIDGYRRAYIQALKPVFETTLAVLLDLDGLKLSYYRGWDKDRPLADVLATSL 240
           +EL   +++I  +R  Y  A+      T    L    L  S+ RGW+K+   ADVL  S 
Sbjct: 179 KELIPLAEQISTWRAEYSSAIAQDMADTCQQFLPEFSLTFSFQRGWEKETDYADVLERSF 238

Query: 241 ERDRALGHTQSGPQRADLRLKVGNHNAAEVLSRGQQKLVVCALRIAQGHLVSEAKRGQCI 300
           ERDR L +T  GP +AD R++       + LSRGQ KL++CALR+AQG  ++     +C+
Sbjct: 239 ERDRMLTYTAHGPHKADFRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRESGRRCL 298

Query: 301 YLVDDLPSELDAQHRQALCKLLEQLGCQVFITCVDSTVLQEGWHEQTPVSMFHVEHGQIT 360
           YL+DD  SELD   R  L   L+    QVF++ + +  + +   E +   MF VE G+IT
Sbjct: 299 YLIDDFASELDDARRGLLASRLKATQSQVFVSAISAEHVIDMSDENS--KMFTVEKGKIT 356