Pairwise Alignments

Query, 370 a.a., recF protein from Pseudomonas stutzeri RCH2

Subject, 375 a.a., recF-like protein from Agrobacterium fabrum C58

 Score =  123 bits (309), Expect = 7e-33
 Identities = 112/374 (29%), Positives = 165/374 (44%), Gaps = 18/374 (4%)

Query: 1   MSLSRLSVTGVRNLHPVTLSPCPRINILFGDNGSGKTSLLEAIHLLGLARSFRSIRLNPV 60
           +SLSRL +T  RN     L    R  +L GDNGSGKT+LLEA+  L   R  R   L+ V
Sbjct: 5   VSLSRLKLTDFRNYAAAALVLDERHVVLTGDNGSGKTNLLEAVSFLSPGRGLRRAVLSDV 64

Query: 61  --ITYEQSACTVFGQVELPDQHSRALGVARDRSGEV---RIRIDGQSVRSAAELADTLPL 115
             +  E +  ++F  V+  D    A+G   +  GEV   R+R++G  V+S  EL D L +
Sbjct: 65  TRVGAEATGFSIFADVDGMDGEV-AIGTGIEGDGEVVSRRLRLNGTPVKSVDELTDHLRV 123

Query: 116 QLINPDSFRLLEGAPKLRRQFLDWGVFHVEHRFMAAWQRLQQALRQRNSWLRHGTLDGAS 175
             + P    L  G+   RR+FLD  V  ++          ++A+R RN  L  G  D   
Sbjct: 124 LWLTPAMDGLFTGSSSDRRRFLDRLVLSLDPGHGRRASDFEKAMRGRNRLLSEGRFDPVW 183

Query: 176 NAAWSRELTLASDEIDGYRRAYIQALKPVFETTLA-VLLDLDGLKLSYYRGWDKDRPLAD 234
                +++      +   R   +  LK + E            L L+ +     +RP  D
Sbjct: 184 LDGIEKQMAELGISMAVARYEMLGLLKTLIEGRAGNAAFPSATLSLAGFMDDRLNRPAVD 243

Query: 235 -------VLATSLERDRALGHTQSGPQRADLRLKVGNHN-AAEVLSRGQQKLVVCALRIA 286
                  +L     RD A G T  GP R DL ++    N  AE  S G+QK ++  L +A
Sbjct: 244 LEDEYGLMLRDGRYRDAAAGRTLDGPHRVDLFVRHAEKNMEAERCSTGEQKALLVGLVLA 303

Query: 287 QGHLVSEAKRGQCIYLVDDLPSELDAQHRQALCKLLEQLGCQVFITCVDSTVLQEGWHEQ 346
              L +       + L+D++ + LD   R AL  L+  LG Q F+T  D+ +        
Sbjct: 304 HAQLTANMTGYAPVLLLDEIAAHLDEGRRAALFDLIHALGGQSFMTGTDAAMFSALGER- 362

Query: 347 TPVSMFHVEHGQIT 360
                F+V HG IT
Sbjct: 363 --AQFFNVSHGGIT 374