Pairwise Alignments

Query, 367 a.a., TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component from Pseudomonas stutzeri RCH2

Subject, 369 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  177 bits (449), Expect = 4e-49
 Identities = 112/317 (35%), Positives = 160/317 (50%), Gaps = 4/317 (1%)

Query: 37  AEQQTFNWKMVTSWPKNFPGVGVGAERFANLVNEMSGGRLKIKVYAAGELVPALEVFDAV 96
           A  QT   +  ++WP         A+ FA  VN+M+G RLKI+V  AG +VPA ++ DAV
Sbjct: 30  ATAQTTTLRFQSTWPAK-DIFHEYAQDFAKKVNDMAGSRLKIEVLPAGSVVPAFQLLDAV 88

Query: 97  SRGTAEMGHGAPYYWKGKVPAAQFFCALP-FGPNAQEMNAWLHRGGGMQLWEEVYKPYG- 154
           ++GT + GHG   YW GK  A   + + P +G +A  + AW   GGG  L EE+YK    
Sbjct: 89  AKGTLDGGHGVVAYWYGKNSALALWGSGPGYGMDANMVLAWHKYGGGKALMEEIYKSLNL 148

Query: 155 -VLPMACGATGVQTAGWFNKEINSVDDFKGLKMRTPGLGGEVLTKMGGTVVNMPAGEIFT 213
            V+    G    Q  GWF K +  V D KGLK RT GL  +V T MG  V  +P GEI  
Sbjct: 149 DVVSYLSGPMPCQPLGWFKKPVAKVTDMKGLKFRTVGLAVDVFTDMGTAVNPLPGGEIVP 208

Query: 214 ALQTGAIDATEWIGPYNDLALGLHKASKYYYTPGWQEPNVTFELDVNLKAWDTLPDDLKA 273
           AL  G IDA E+    +D  LG    +K      + +    FE+  N    + LP +LKA
Sbjct: 209 ALDRGLIDAAEFNNASSDRVLGFPDVAKNCMLQSFHQSGEQFEILFNKTKLNALPAELKA 268

Query: 274 IVRAAARDVNGDMLDDYNAKNMEALEQLREQGVEVRRLPDEVLARLKEVAAEVVDASAKA 333
           I+  AA   + DM      +N +  E L++ G++  + PD +L        + +   A  
Sbjct: 269 IIDNAAEAASADMSWKAIDRNSQDYEALKKDGIKFYKTPDPILRAQLASWDKTIAKKAGE 328

Query: 334 DPVASKVWEQQSAYLKR 350
           +P+  KV + Q A+ +R
Sbjct: 329 NPLFKKVLDSQKAFAQR 345