Pairwise Alignments

Query, 641 a.a., ATP-dependent DNA helicase, RecQ family from Pseudomonas stutzeri RCH2

Subject, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas simiae WCS417

 Score =  258 bits (659), Expect = 6e-73
 Identities = 141/341 (41%), Positives = 204/341 (59%), Gaps = 2/341 (0%)

Query: 3   EQTLVQTFGYDRFRTGQEQAIRAVVAGRSVAAIFPTGSGKSLCYQLPALLLPHLTLVVSP 62
           ++ L   FGYD FR  Q   I  V +G     + PTG GKSLC+Q+PALL   L +VVSP
Sbjct: 6   QRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLAVVVSP 65

Query: 63  LLALMQDQLAFLHRHGIAAASIDSAQSREQASETMARAKSGELKILMISVERLKNERFRN 122
           L+ALM DQ+A L   G+AAAS++S  S EQ  +  AR K GE+K+L ++ ERL   R   
Sbjct: 66  LIALMDDQVATLEELGVAAASLNSTLSAEQQRDLAARIKRGEVKMLYLAPERLVQPRMLA 125

Query: 123 FISQVPISLLVVDEAHCISEWGHNFRPDYLKLPDYQRQFNIPQVLLLTATATPPVIADMQ 182
           F+  + I+L  +DEAHC+S+WGH+FR +YL+L      F     + LTATA      ++ 
Sbjct: 126 FLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRTREEIV 185

Query: 183 GKFAIAADDVVTTGFYRPNLNLLVEPVSGFNKQRRLVEWLGDKSGQPTIVYVTQQKTAEQ 242
            +  +   +   + F R N+   + P     KQ  L+ +L ++     IVY   +K  ++
Sbjct: 186 ERLHLQNAERFLSSFDRSNIFYRIVPKEQPRKQ--LLAFLSERRSDAGIVYCLSRKKVDE 243

Query: 243 IAEHLAQRGFPASAYHAGMAHELRESIQRRFMAGELNCIVATIAFGMGIDKADIRNVVHY 302
           +A  L ++G+PA  YHAG+ ++LR   Q+RF+  E   +VATIAFGMGIDK+++R V H 
Sbjct: 244 VAAFLCEQGYPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKSNVRFVAHM 303

Query: 303 DLPKSVENYSQEIGRAGRDGQPSDCLVLANRDSLSVLQNFV 343
           DLPKS+E Y QE GRAGRDG P+D  ++     + +L+  +
Sbjct: 304 DLPKSLEAYYQETGRAGRDGLPADAWMVYGLQDVVMLKQML 344



 Score = 43.5 bits (101), Expect = 3e-08
 Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 1/47 (2%)

Query: 510 KQHEASEITRIDNMLALFESAECLSQRLAAYFGDRQAPQHCGHCSVC 556
           ++H+  E  ++D ML+L E   C  Q L AYF D   P+ CGHC  C
Sbjct: 351 ERHKRLEQHKLDAMLSLCEETRCRRQTLLAYF-DEDMPEPCGHCDNC 396