Pairwise Alignments

Query, 290 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

Subject, 1616 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  172 bits (435), Expect = 6e-47
 Identities = 98/237 (41%), Positives = 144/237 (60%), Gaps = 9/237 (3%)

Query: 45   TQADQLRQ-ASELKSRFLSYMSHEFRTPLGSILSITRLLSDELDGPLSPEQHKQVRFVSS 103
            T+A +L + A+ +KS FL+ MSHE RTP+ +I+ ++ L    L   L+P QH  V+ + S
Sbjct: 873  TRAKELAEDATRMKSDFLANMSHEIRTPMNAIIGMSHLA---LKTELTPRQHDYVKKIQS 929

Query: 104  AASELSEMVDDLLDLAKIEAGRVSISPAWFDMLDLFSALRGMFRPIVEGSPVDLIFEEPV 163
            A   L  +++D+LD +KIEAG++++    F++  +   +  +         ++L+F+ P 
Sbjct: 930  AGQHLLGIINDILDFSKIEAGKLAVEHTDFELDKVLDNIANLLTEKTRAKSLELVFDIPS 989

Query: 164  GLPRFYTDDK-KLAQILRNFISNALKFTPQGEV----RVSARMENPQQVRFAVSDTGIGI 218
             +PR    D  +L QIL N+ +NA+KFT  GE+    RV  R E    + FAV DTGIGI
Sbjct: 990  EVPRTLVGDSLRLGQILINYANNAVKFTENGEIDIIARVKERSETEVLLYFAVRDTGIGI 1049

Query: 219  AAELHDRLFEDFAQVDSPLQKRLRGTGLGLALCKRFAELLGGRVGVESTPGKGSEFY 275
             AE   RLF+ F Q D+   ++  GTGLGLA+ KR AEL+GG VGVES  GKGS F+
Sbjct: 1050 TAEQAARLFQSFEQADTSTTRKFGGTGLGLAISKRLAELMGGEVGVESEYGKGSTFW 1106