Pairwise Alignments

Query, 596 a.a., Acyl-CoA dehydrogenases from Pseudomonas stutzeri RCH2

Subject, 596 a.a., Acyl-CoA dehydrogenase 2 [fadN-fadA-fadE operon] (EC 1.3.8.7) from Sphingobium sp. HT1-2

 Score =  594 bits (1532), Expect = e-174
 Identities = 308/594 (51%), Positives = 398/594 (67%), Gaps = 3/594 (0%)

Query: 3   YKAPLRDMRFVLHELFDATAHCELLG-NGLDRELIDGVLEEAARYTGGEIAPLNRNSDEE 61
           Y APLRDMRFVL+EL       ++   +    +L D +LEEAAR+    + P+NR+ DEE
Sbjct: 4   YDAPLRDMRFVLNELHADDGFGDIPALSEFTPDLTDAILEEAARFCRDVLLPINRSGDEE 63

Query: 62  GVTLENGEVRTPQGFVEAYRQYVDNGWASMTGPTEYGGQGFPQLVACNFHEMLMGASLSF 121
           G  LENG VRTP GF EAY+Q+ + GW ++    E+GGQG P+ V     EM+  ++LSF
Sbjct: 64  GCHLENGVVRTPAGFPEAYKQFAEGGWTALASDPEWGGQGLPEAVNKLVEEMICSSNLSF 123

Query: 122 RIYSGLTEGAVLALYKHGSDELKNAYLEKLVSGSWSGTMCLTEPQAGTDLALLRTRAEPQ 181
            +Y GLT GA  A+  HGSD LK AYL K+VSG WSGTMCLTEP  GTDL LLR+RA PQ
Sbjct: 124 GLYPGLTHGATTAIEGHGSDALKQAYLPKMVSGQWSGTMCLTEPHCGTDLGLLRSRAVPQ 183

Query: 182 ADGSYKVSGSKIFISGGEHDMSENIVHLVLARLPDAPAGVKGISLLLVPKFIANADGTLG 241
            DGSYKV+GSKIFIS GEHD++ENI+HLVLARLPDAP GVKGISL LVPK++   DGT G
Sbjct: 184 GDGSYKVTGSKIFISAGEHDLTENIIHLVLARLPDAPKGVKGISLFLVPKYLPREDGTPG 243

Query: 242 ERNALSCGAVEHKMGIKGAATCVMNFDGATGWVVGAPNQGLACMFTMMNDARFQVGLQGL 301
           + N ++C A+EHKMG+K +ATC MNFD + GW+VG P +G+A MFTMMN  R  VG+QGL
Sbjct: 244 QSNGVACAAIEHKMGLKASATCQMNFDDSIGWIVGEPGKGMAAMFTMMNTERVSVGIQGL 303

Query: 302 GIAEQAYQGSLAYARERLQSRGLAGVQHPDKPADPIIVHPDVRRMLLTQKTLVEGSRMLA 361
           G+ E AYQ +  YA++R+Q R L+G ++PD+ ADPIIVHPDVRRML+T +   EG R L+
Sbjct: 304 GVGEAAYQAAAWYAKDRIQGRALSGPKYPDQAADPIIVHPDVRRMLMTMRAYNEGCRALS 363

Query: 362 AYCARQLDLEHGHPEPSHRKAASTRAALLIPIVKAFFTDMGQEVASLGVQVYGGHGYIRE 421
           A+ +R LD E   PEP  R+ AS   AL+ P+VKA FTD+  + A+L VQ YGGHGYIRE
Sbjct: 364 AWVSRALDAEKHSPEPEVRQRASDFIALMTPVVKALFTDLAFDSANLAVQCYGGHGYIRE 423

Query: 422 WGMEQLMRDSRITQLYEGTNGIQALDYIRRKLLGDGGAELSALQAEFSE-ICDRQIDRPA 480
            G+EQ  RD+RIT +YEGTNG+QALD + RKL    G  L +     S  I +  +D P 
Sbjct: 424 SGVEQYARDARITMIYEGTNGVQALDLVGRKLGAHMGRYLRSFFHPVSAFIEENNVDGP- 482

Query: 481 LHDMASKVQARIGEWRELTAEIIAATGRDPQEIGAVSVDFLQYSAYVLLAGLWLQAAGRA 540
           +  M   +    G  +  TA +     +DP+E GA S D+L+    V +   + +A   A
Sbjct: 483 MKPMIEALAKAFGALQLSTATVAQRALKDPEEAGAASADYLRLMGLVAMGYCFAKATKIA 542

Query: 541 QDALEQGSAEEAFYQAKLASADFYLRRVLPRASAHREAIQGGAACLMALPESDF 594
              L  GS ++ FY AK+ +A F+  R+LP+A+A   AI+ G   LMAL +  F
Sbjct: 543 GLQLFFGSEDKRFYDAKIKTATFFFERILPQATASFLAIKAGKKSLMALEDDVF 596