Pairwise Alignments

Query, 360 a.a., Signal transduction histidine kinase, nitrogen specific from Pseudomonas stutzeri RCH2

Subject, 608 a.a., sensory histidine kinase in two-component regulatory system with AtoC from Escherichia coli BL21

 Score =  127 bits (319), Expect = 8e-34
 Identities = 99/356 (27%), Positives = 178/356 (50%), Gaps = 26/356 (7%)

Query: 6   LQRLLIENLTTATLLLNSRLRLEYMNPAAEMLLAVSGQRSHGQFISELFTESPEALAALR 65
           L  L+IEN     + ++ +  +  MNPAAE++         GQ  S LF ++ +  + + 
Sbjct: 263 LNDLIIENAADGVIAIDRQGDVTTMNPAAEVITGYQRHELVGQPYSMLF-DNTQFYSPVL 321

Query: 66  QAVEEAHPFTKREATLTSATGQSLTVDYAVTP--VLTRQETMLLLEVLPRDRLLR--ITK 121
             +E     T+  A   S  G+  T++ +VT   +      M+   V+  D   R    +
Sbjct: 322 DTLEHG---TEHVALEISFPGRDRTIELSVTTSRIHNTHGEMIGALVIFSDLTARKETQR 378

Query: 122 EEAQLSKQETTKMLVRGLAHEIKNPLGGIRGAAQLLARELPEEHLKDYTEVIIEEADRLR 181
             AQ  +  T   L+ G+AHE++NPL  IRG  Q+L ++  +   ++Y  V+++E D + 
Sbjct: 379 RMAQAERLATLGELMAGVAHEVRNPLTAIRGYVQILRQQTSDPIHQEYLSVVLKEIDSIN 438

Query: 182 NLVDRMLGSNKL--PSLAMTNIHEVLEHVASLIE-AECQGSIILVRDYDPSIPEVLMDRE 238
            ++ ++L  ++         +++ ++E    L++ A  Q  +  + + D  +  +  DRE
Sbjct: 439 KVIQQLLEFSRPRHSQWQQVSLNALVEETLVLVQTAGVQARVDFISELDNELSPINADRE 498

Query: 239 QMIQAVLNIMRNAMQALAGQNDLGLGRLTLRTRTLRQFTIGHIRHRLVARIEIIDNGPGI 298
            + Q +LNI+ NA+QA++ +     G++ ++T    Q++           I I DNG GI
Sbjct: 499 LLKQVLLNILINAVQAISAR-----GKIRIQTW---QYSDSQ------QAISIEDNGCGI 544

Query: 299 PAELQNTLFYPMVSGRPDGTGLGLAITQNIISQHQGLIECESHPGH-TVFSIFLPL 353
              LQ  +F P  + +  GTGLGLA++Q II+ HQG I   S PG+   F++ LP+
Sbjct: 545 DLSLQKKIFDPFFTTKASGTGLGLALSQRIINAHQGDIRVASLPGYGATFTLILPI 600