Pairwise Alignments

Query, 360 a.a., Signal transduction histidine kinase, nitrogen specific from Pseudomonas stutzeri RCH2

Subject, 382 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score =  174 bits (440), Expect = 5e-48
 Identities = 114/353 (32%), Positives = 187/353 (52%), Gaps = 8/353 (2%)

Query: 6   LQRLLIENLTTATLLLNSRLRLEYMNPAAEMLLAVSGQRSHGQFISELFTESPEALAALR 65
           L   ++  +    +L++    + + N  AE     S        +S         LA + 
Sbjct: 14  LAMAVLNAVQNPVILVDGEGFISFANWEAEAFFGASASHLARYRVSTFIPFGSPLLALID 73

Query: 66  QAVEEAHPFTKREATLTSAT-GQSLTVDYAVTPVLTRQETMLLLEVLPRDRLLRITKEEA 124
           Q  E   P  +    L+S   GQ   VD  V PV++   +++++    R    +I ++  
Sbjct: 74  QVRERRAPVNEYRVDLSSPRLGQDKLVDLYVAPVVSEPGSVVVV-FQERSMADKIDRQLT 132

Query: 125 QLSKQETTKMLVRGLAHEIKNPLGGIRGAAQLLARELPEEHLKDYTEVIIEEADRLRNLV 184
             +   +   L   LAHEIKNPL GIRGAAQLL   +P+E  +  T +I +E DR+ +LV
Sbjct: 133 HRAAARSVTGLASMLAHEIKNPLSGIRGAAQLLEMSVPDED-RALTRLICDETDRIVSLV 191

Query: 185 DRM-LGSNKLP-SLAMTNIHEVLEHVASLIEAECQGSIILVRDYDPSIPEVLMDREQMIQ 242
           DRM + S++ P      NIH VL+HV ++ +A    +I +  +YDPS+P V  +R+Q++Q
Sbjct: 192 DRMEIFSDERPVDRVPVNIHSVLDHVKAIAKAGFARNIKISENYDPSLPAVYANRDQLVQ 251

Query: 243 AVLNIMRNAMQALAGQNDLGLGRLTLRTRTLRQFTIGHIRHRLVARIE--IIDNGPGIPA 300
             LN+++NA +A+A Q D G   LT   R   + ++   R R+   +E  + DNGPG+P+
Sbjct: 252 VFLNLVKNAAEAVANQPD-GEVVLTTAYRPGIRLSVAGSRERISLPLEFCVHDNGPGVPS 310

Query: 301 ELQNTLFYPMVSGRPDGTGLGLAITQNIISQHQGLIECESHPGHTVFSIFLPL 353
           +L   LF P ++ + +G+GLGLA+   +I  H G++EC+S    T F + +P+
Sbjct: 311 DLLPHLFDPFITTKTNGSGLGLALVAKLIGAHGGIVECDSQNHRTTFRVLMPV 363