Pairwise Alignments

Query, 790 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  215 bits (548), Expect = 1e-59
 Identities = 141/458 (30%), Positives = 225/458 (49%), Gaps = 23/458 (5%)

Query: 309  DGGEIGRLTVNMKTLHERNTEALERIQVISWTDSLTQISNRAHFGVLASAMYERCLQSHR 368
            D G++         + ER     +RI  +++ D+LT + NR  F      +Y    Q+ R
Sbjct: 813  DEGDLASYVCFFTDISERKASE-QRIHRLAYYDALTHLPNRTLF---QDRLYNALQQAER 868

Query: 369  RLA---LLFLDLDNFKQVNDQHGHDAGDTLLRIFAQRVRGLLKRHQLDHPQTDVAFARLS 425
            + A   L+FLDLD FK +ND  GH AGD +L+  A R+   +          D   AR+ 
Sbjct: 869  QKAWVVLMFLDLDRFKPINDSLGHAAGDRMLKDMALRLLACV--------DDDDTVARMG 920

Query: 426  GDEFAILL----LTDAGDGGVDELCAALLDLCRGGFRLEDRLYPVGVSIGTARYPDDADS 481
            GDEF +LL      +        +   +L      F LE+R + V  SIG A  P D   
Sbjct: 921  GDEFTLLLQPRPTREMALNRAIHVAENILGSLVRPFVLENREFFVTASIGIALSPQDGSE 980

Query: 482  ITQLLTRADTAMYQAKAEGKSTAVAFSRELEQRN-ERIRLIEEQLRALDGDDQLRLVYMP 540
            ++QL+  ADTAMY AK  GK+    +  E+     ER+ L E  LR     ++  L Y P
Sbjct: 981  LSQLMKNADTAMYHAKERGKNNFQFYQAEMNASALERLEL-ESDLRHAMEQNEFILYYQP 1039

Query: 541  ALNREGT-VVSCEVLLRWHSPILGTVSPGEFIPIAERAGLHSRIDNWVIDRALTEYPKLV 599
              + +G  +   E LLRW  P  G V PG+FIP+ E  GL   + +WV+  A  +     
Sbjct: 1040 QFSGDGKRLTGAEALLRWRHPTRGLVPPGDFIPVIEELGLVVDVGDWVLREASRQLKAWH 1099

Query: 600  ELFGAEVILAINVSSAQLADDRICSYLLERAAHHGVAPGRIEIELTETYAAELCAGTMDV 659
            +       +++N+S+ Q +D ++ + +       G+ P  +E+ELTE+         + +
Sbjct: 1100 KAKVRVPKVSVNISARQFSDGQLGTRIANILEESGLPPACLELELTESILMREVNEALQI 1159

Query: 660  VQAIRRAGFRVAIDDFGVGYTSIQQLLEYPADTIKLDMAIITRLTQPDMQQSLS-ALVAF 718
            + +++  G  +A+DDFG GY+S+  L ++P D +K+D   +  L + +    ++ A++A 
Sbjct: 1160 LASLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPEGEQDAQIARAIIAM 1219

Query: 719  CHAQGKRVNAEGVDTMDKQSALLQAGCDLFQGYLISPP 756
             H+    V AEGV+T ++   L + GCD  QGYL   P
Sbjct: 1220 AHSLNLAVIAEGVETHEQLEFLREHGCDEVQGYLFGRP 1257