Pairwise Alignments

Query, 358 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Pseudomonas stutzeri RCH2

Subject, 334 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 94.0 bits (232), Expect = 5e-24
 Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 5/227 (2%)

Query: 112 WLCERYAAGATLAAACSGAMLLARTGLLAGCEGTSHWGYCDCLRREYPDVHWHPDKALVS 171
           W+ E+      + + C+GA LLA +G+L GC   +HW  C+ L R++P +    +   + 
Sbjct: 96  WVREKAKHTRRMTSVCTGAFLLAASGMLDGCRVATHWTRCEELARKFPSLTVESNPIFIQ 155

Query: 172 TGVGQRLVMSGSG-SSWHALGLFLIARFVGAREAMEVARMNLFDWDATSPLAYAAMMRTG 230
            G     V + +G ++   L L L+   +G   A+EVAR  +         +  ++  + 
Sbjct: 156 QGA----VWTSAGVTAGIDLCLALVEEDLGRAIALEVARHLVVFLKRPGGQSQFSVTLSL 211

Query: 231 QLADPVIARCQEWAAQHYEEEAPVSAMVRISGLPERTFQRRFALATGLTPLDYIHTLRLE 290
           Q  D   A    W A++   +  +  +   +G+ ER+F R +   TG TP   +  +R+E
Sbjct: 212 QKDDSRFAELHAWMAENLTLDLNIPTLAAQAGMSERSFVRHYRAETGQTPARAVELIRVE 271

Query: 291 EAKQLLESGELSVEAIAWEVGYQDAGFFGRLFRRKVGLTPAQYRRRF 337
            A++ L     S++ IA + G+       R F R + +TP  YR RF
Sbjct: 272 TARRQLADSTASIKRIAVQCGFGCEETLRRSFLRALSVTPQAYRERF 318