Pairwise Alignments

Query, 358 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Pseudomonas stutzeri RCH2

Subject, 330 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  156 bits (395), Expect = 6e-43
 Identities = 110/334 (32%), Positives = 162/334 (48%), Gaps = 15/334 (4%)

Query: 12  LTVALLATPDSTASTLFGLYDLLLGARRDWQQLLHRADVASPFLPLIVSRDGRSLRVYND 71
           L + LL  P    + + GL DL L A R        A++ +  LP I     ++      
Sbjct: 11  LDIGLLLYPGVQRAAVHGLADLFLVANRV------AAELGAVELPHIRVSCWQADETGQL 64

Query: 72  IPVHPHTSLDDAPPTDVVIVSNLAVSPWEPLDDRY-APEAQWLCERYAAGATLAAACSGA 130
           +P   ++++       ++I  +L  +P   L +R+ AP    LC  +  G  LA+ C G 
Sbjct: 65  LPASDNSAVTVPGLRVLIIPPSLESAPQAELLERHRAP----LCLLHGRGTVLASVCIGV 120

Query: 131 MLLARTGLLAGCEGTSHWGYCDCLRREYPDVHWHPDKALVSTGVGQRLVMSGSGSSWHAL 190
             +A +GLL G    +HW Y   L + +P V     + L+  G    +V S    +W  L
Sbjct: 121 FFIAASGLLDGRPACTHWNYVHALAQRFPRVRVEAQQPLLDDG---DIVTSAGLMAWTDL 177

Query: 191 GLFLIARFVGAREAMEVARMNLFDWDATSPLAYAAMMRTGQLADPVIARCQEWAAQHYEE 250
           GL L+ RF+G   A E AR    D    +PL  A         D  + + Q W   +  +
Sbjct: 178 GLRLLERFLGTTVAQETARYLAVD-PVAAPLPGAVFNPRLDHGDEAVLKVQHWLQGNGGQ 236

Query: 251 EAPVSAMVRISGLPERTFQRRFALATGLTPLDYIHTLRLEEAKQLLESGELSVEAIAWEV 310
           +A ++ M   +GL  RTF RRF  ATGL P +Y   +R+  A +LLE    +VE IAW V
Sbjct: 237 DADLATMAACAGLEARTFLRRFRAATGLRPTEYCQQVRVGRACRLLEFTRRTVEQIAWGV 296

Query: 311 GYQDAGFFGRLFRRKVGLTPAQYRRRFGVLSRRL 344
           GYQD G F ++F+R +GLTP+ YRRRF V  + L
Sbjct: 297 GYQDPGAFRKVFQRVIGLTPSDYRRRFAVSGQGL 330