Pairwise Alignments

Query, 657 a.a., choline/carnitine/betaine transport from Pseudomonas stutzeri RCH2

Subject, 666 a.a., BCCT family transporter from Pseudomonas fluorescens SBW25

 Score =  621 bits (1601), Expect = 0.0
 Identities = 312/653 (47%), Positives = 427/653 (65%), Gaps = 6/653 (0%)

Query: 11  LNAPVFYGSAVIILALVIYSVAFQSHAQTLFGDTQAWIIANVSWLYILAVALILLMVVLL 70
           +NAPVFY +A  IL   I  +A    A       Q W    V W Y+LA+ L L+ VV+ 
Sbjct: 14  MNAPVFYFAATFILLFGITVIAIPQQAGAWLLAAQNWAANTVGWYYMLAMTLYLVFVVVT 73

Query: 71  AFSRYGDIKLGPDHSEPDYSALTWFAMLFSAGMGIGLMFFGVAEPVMHFLSPPTGEGGTT 130
           A S YG IKLG DH EP++S L+W  MLF+AG+ I L FF V+EP+ H + PP G     
Sbjct: 74  ALSGYGKIKLGADHDEPEFSYLSWAGMLFAAGISITLFFFCVSEPLTHLVQPPQGAPLNA 133

Query: 131 LAAREAMKITFFHWGLHAWSIYAIVAMILAYFAYRHGLPLTLRSALYPLIGERIYGPIGH 190
            AAR+AM++ F HWGLH W ++A V M LAYFAYRH LPL LRSALYPLIG+RI GPIG+
Sbjct: 134 DAARQAMQVLFLHWGLHGWGVFAFVGMALAYFAYRHNLPLALRSALYPLIGKRINGPIGY 193

Query: 191 AVDIFAIIGTVLGVATSLGLGVTQINTGLNHLYGLPISVPVQIGLIIATTLLATVSVVTG 250
           AVD F II TV G+   +G GV  +N+GL++L+G+  +  +Q+GLI      A +  V G
Sbjct: 194 AVDGFGIIATVFGLGADMGFGVLHLNSGLDYLFGIAHTQWIQVGLITLMMGAAILVAVAG 253

Query: 251 LDKGVRRLSELNLTLAALLLLMVLVAGPTVFILQTFVQNTGSYLSDIVDKTFNLYAYE-P 309
           +DKGVR +S++N+ LA  LLL VL AGPT  +L T +QN G YL  +  K+F++YAY+ P
Sbjct: 254 VDKGVRVMSDINMLLACALLLFVLFAGPTQHLLNTLIQNIGDYLGALPTKSFDVYAYDKP 313

Query: 310 NDWIGGWTLFYWGWWLAWSPFVGLFIARISRGRTIREFVAGVLLVPTAFTLLWMTVFGDT 369
           +DW+GGWT+FYW WW+AWSPFVGLFIARISRGRTIREFV GVLL+P  FTL WM++FG++
Sbjct: 314 SDWLGGWTVFYWAWWIAWSPFVGLFIARISRGRTIREFVFGVLLIPLGFTLAWMSIFGNS 373

Query: 370 AIHMILWEHVTSLGDAIEQDSSLALFAFLEHFPFSALISLIAIIMVVVFFVTSADSGALV 429
           AI  +L   + +LG +   D S++L+  LE +P+S  +  + + +  VFFVTSADSG +V
Sbjct: 374 AIDQVLNHGMAALGQSAIDDPSMSLYLLLETYPWSKTVIAVTVFISFVFFVTSADSGTVV 433

Query: 430 VDMLASGG---KQGTPVWQRIFWAMSMGGVAIALLLADGLTALQTATIASALPFTIALLC 486
           +  L+S G    +  P W R+FW      V  ALL A  + +L++A + ++LPF++ LL 
Sbjct: 434 LSTLSSKGGNADEDGPKWLRVFWGAMTALVTSALLFAGSIDSLKSAVVLTSLPFSMILLL 493

Query: 487 SMWGLLKALRLDATKQGLRYQALSTSPSAPRTAGGWQRRLRTLMLFPRRAHVVRFITEVV 546
            MWGL KA  L++ KQ  +  +L+   +A +  GGW++RL   + FP R  V RF+   V
Sbjct: 494 MMWGLHKAFHLESQKQIAQLHSLAPISAARKGRGGWRQRLSQAVHFPSRDEVYRFLEATV 553

Query: 547 RPAYEDIAEEMRKQGY-VVEISEGEDRRLRFEITHDGEPDFIYEVRPRAYAMPSFV-ATS 604
           RPA E++     ++G  VV   +  +  +  EI H  E  F+Y+V+ R Y  PSF     
Sbjct: 554 RPAIEEVTAVFVEKGLNVVTQPDPANDSVSLEIGHGEEHPFVYQVQMRGYFTPSFARGGM 613

Query: 605 DDDEREERKYFRAEVHLKEGGQDYDVMGWSREDVISDILGQYEKHMHFLHMVR 657
              E   R+Y+RAEVHL EG QDYD++G+++E +I+DIL QYE+H+ FLH+VR
Sbjct: 614 GSKELNNRRYYRAEVHLSEGSQDYDLVGYTKEQIINDILDQYERHLQFLHLVR 666