Pairwise Alignments

Query, 657 a.a., choline/carnitine/betaine transport from Pseudomonas stutzeri RCH2

Subject, 481 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

 Score =  204 bits (519), Expect = 7e-57
 Identities = 130/446 (29%), Positives = 228/446 (51%), Gaps = 10/446 (2%)

Query: 60  VALILLMVVLLAFSRYGDIKLGPDHSEPDYSALTWFAMLFSAGMGIGLMFFGVAEPVMHF 119
           V L + +V+ LA S+YG+I+LG    +P+YS L+W  M   AG+G   +++GVAE   ++
Sbjct: 2   VLLAMGLVIYLATSKYGNIRLG--EGKPEYSTLSWLFMFICAGLGSSTLYWGVAEWAYYY 59

Query: 120 LSPPTGEGGTTLAARE-AMKITFFHWGLHAWSIYAIVAMILAY-FAYRHGLPLTLRSALY 177
            +P       +  A E ++  +FFHWG+ AW+ Y + ++I+AY F  R    L+L   + 
Sbjct: 60  QTPGLNIAPRSQQALEFSVPYSFFHWGISAWATYTLASLIMAYHFHVRKNKGLSLSGIIA 119

Query: 178 PLIGERIYGPIGHAVDIFAIIGTVLGVATSLGLGVTQINTGLNHLYGLPISVPVQIGLII 237
            + G R  GP G  VD+  +I TV  +  SL +       GL+ L GLP +  VQ  +I+
Sbjct: 120 AITGVRPQGPWGKLVDLMFLIATVGALTISLVVTAATFTRGLSALTGLPDNFTVQAFVIL 179

Query: 238 ATTLLATVSVVTGLDKGVRRLSELNLTLAALLLLMVLVAGPTVFILQTFVQNTGSYLSDI 297
            +  +  +S   G++ G++RLS++    A LL L+VL+ GPT FI  + +   G    + 
Sbjct: 180 LSGGIFCLSSWIGINNGLQRLSKMVGWGAFLLPLLVLIVGPTEFITNSIINAIGLTTQNF 239

Query: 298 VDKTFNLYAYEPNDWIGGWTLFYWGWWLAWSPFVGLFIARISRGRTIREFVAGVLLVPTA 357
           +  +          +   WT+FYW WW++++P V +F+ R+SRGR I+E + G++L  T 
Sbjct: 240 LQMSLFTDPLGDGSFTRNWTVFYWLWWISYTPGVAMFVTRVSRGRKIKEVIWGLILGSTV 299

Query: 358 FTLLWMTVFGDTAIHMILWEHVTSLGDAIEQ-DSSLALFAFLEHFPFSALISLIAIIMVV 416
               +  V    AIH  +   V ++   +E      A+   L   P   L     + +++
Sbjct: 300 GCWFFFGVMESYAIHQFI-NGVINVPQVLETLGGETAVQQVLMSLPAGKLFLAAYLGVMI 358

Query: 417 VFFVTSADSGALVVDMLASGGKQ---GTPVWQRIFWAMSMGGVAIALLLAD-GLTALQTA 472
           +F  +  D+ A  +   ++   Q         R+FW + +  + +++L     L  ++T 
Sbjct: 359 IFLASHMDAVAYTMAATSTRNLQEGDDPDRGLRLFWCVVITLIPLSILFTGASLETMKTT 418

Query: 473 TIASALPFTIALLCSMWGLLKALRLD 498
            + +ALPF + LL  + G ++ L+ D
Sbjct: 419 VVLTALPFLVILLVKVGGFIRWLKQD 444