Pairwise Alignments

Query, 657 a.a., choline/carnitine/betaine transport from Pseudomonas stutzeri RCH2

Subject, 677 a.a., choline transporter of high affinity (NCBI) from Escherichia coli BW25113

 Score =  553 bits (1424), Expect = e-161
 Identities = 278/657 (42%), Positives = 422/657 (64%), Gaps = 14/657 (2%)

Query: 11  LNAPVFYGSAVIILALVIYSVAFQSHAQTLFGDTQAWIIANVSWLYILAVALILLMVVLL 70
           +N  VFY SA +IL   + ++ F+  +    G T  W+     W Y+LA  L ++ VV +
Sbjct: 13  INPVVFYTSAGLILLFSLTTILFRDFSALWIGRTLDWVSKTFGWYYLLAATLYIVFVVCI 72

Query: 71  AFSRYGDIKLGPDHSEPDYSALTWFAMLFSAGMGIGLMFFGVAEPVMHFLSPPTGEGGTT 130
           A SR+G +KLGP+ S+P++S L+W AMLF+AG+GI LMFF VAEPV  ++ PP G G T 
Sbjct: 73  ACSRFGSVKLGPEQSKPEFSLLSWAAMLFAAGIGIDLMFFSVAEPVTQYMQPPEGAGQTI 132

Query: 131 LAAREAMKITFFHWGLHAWSIYAIVAMILAYFAYRHGLPLTLRSALYPLIGERIYGPIGH 190
            AAR+AM  T FH+GL  WS+YA++ M L YF+YR+ LPLT+RSALYP+ G+RI GPIGH
Sbjct: 133 EAARQAMVWTLFHYGLTGWSMYALMGMALGYFSYRYNLPLTIRSALYPIFGKRINGPIGH 192

Query: 191 AVDIFAIIGTVLGVATSLGLGVTQINTGLNHLYGLPISVPVQIGLIIATTLLATVSVVTG 250
           +VDI A+IGT+ G+AT+LG+GV Q+N GL+ L+ +P S+  +  LI  + ++AT+SV +G
Sbjct: 193 SVDIAAVIGTIFGIATTLGIGVVQLNYGLSVLFDIPDSMAAKAALIALSVIIATISVTSG 252

Query: 251 LDKGVRRLSELNLTLAALLLLMVLVAGPTVFILQTFVQNTGSYLSDIVDKTFNLYAYE-P 309
           +DKG+R LSELN+ LA  L+L VL  G T F+L   V N G Y++  +  T N +A++ P
Sbjct: 253 VDKGIRVLSELNVALALGLILFVLFMGDTSFLLNALVLNVGDYVNRFMGMTLNSFAFDRP 312

Query: 310 NDWIGGWTLFYWGWWLAWSPFVGLFIARISRGRTIREFVAGVLLVPTAFTLLWMTVFGDT 369
            +W+  WTLF+W WW+AWSPFVGLF+ARISRGRTIR+FV G L++P  FTLLW++VFG++
Sbjct: 313 VEWMNNWTLFFWAWWVAWSPFVGLFLARISRGRTIRQFVLGTLIIPFTFTLLWLSVFGNS 372

Query: 370 AIHMILWEHVTSLGDAIEQDSSLALFAFLEHFPFSALISLIAIIMVVVFFVTSADSGALV 429
           A++ I+        +A+        ++ L  +P     + +A I  ++F+VTSADSGALV
Sbjct: 373 ALYEIIHGGAAFAEEAMVHPER-GFYSLLAQYPAFTFSASVATITGLLFYVTSADSGALV 431

Query: 430 VDMLASGGK---QGTPVWQRIFWAMSMGGVAIALLLADGLTALQTATIASALPFTIALLC 486
           +    S  K      P W R+FW++++G + + +L+ +G++ALQ  T+   LPF+  +  
Sbjct: 432 LGNFTSQLKDINSDAPGWLRVFWSVAIGLLTLGMLMTNGISALQNTTVIMGLPFSFVIFF 491

Query: 487 SMWGLLKALRLDATKQGLRYQALSTSPSAPRTAGGWQRRLRTLMLFPRRAHVVRFITEVV 546
            M GL K+L+++  ++    +  +  P   +    W++RL  LM +P   +  + +  V 
Sbjct: 492 VMAGLYKSLKVEDYRRESANRDTAPRPLGLQDRLSWKKRLSRLMNYPGTRYTKQMMETVC 551

Query: 547 RPAYEDIAEEMRKQGYVVEI-----SEGEDRRLRFEITHDG-EPDFIYEVRPRAYAMPSF 600
            PA E++A+E+R +G  VE+      EG+       + H G E +F+Y++ P+ Y++P F
Sbjct: 552 YPAMEEVAQELRLRGAYVELKSLPPEEGQQLGHLDLLVHMGEEQNFVYQIWPQQYSVPGF 611

Query: 601 VATSDDDEREERKYFRAEVHLKEGGQDYDVMGWSREDVISDILGQYEKHMHFLHMVR 657
              +      +  Y+R E  L EG Q  D+M +S+E VI+DIL QYE+H++F+H+ R
Sbjct: 612 TYRA---RSGKSTYYRLETFLLEGSQGNDLMDYSKEQVITDILDQYERHLNFIHLHR 665