Pairwise Alignments

Query, 657 a.a., choline/carnitine/betaine transport from Pseudomonas stutzeri RCH2

Subject, 665 a.a., choline transporter from Escherichia coli ECOR38

 Score =  850 bits (2197), Expect = 0.0
 Identities = 422/656 (64%), Positives = 522/656 (79%), Gaps = 6/656 (0%)

Query: 7   SSSHLNAPVFYGSAVIILALVIYSVAFQSHAQTLFGDTQAWIIANVSWLYILAVALILLM 66
           S+S +N  VF+ SA++I  LV ++  F   A   F   Q  I  N SW YILAVALILL 
Sbjct: 11  STSQINKAVFFTSALLIFLLVAFAAVFPDVADKNFKLLQQQIFTNASWFYILAVALILLS 70

Query: 67  VVLLAFSRYGDIKLGPDHSEPDYSALTWFAMLFSAGMGIGLMFFGVAEPVMHFLSPPTGE 126
           V  L  SRYGDIKLGPDH++PD+S  +WFAMLFSAGMGIGLMFFGVAEPVMH+LSPP G 
Sbjct: 71  VTFLGLSRYGDIKLGPDHAQPDFSYHSWFAMLFSAGMGIGLMFFGVAEPVMHYLSPPVGT 130

Query: 127 GGTTLAAREAMKITFFHWGLHAWSIYAIVAMILAYFAYRHGLPLTLRSALYPLIGERIYG 186
             T  AA+EAM++TFFHWGLHAW+IYAIVA+ILA+F+YRHGLPLTLRSALYP+IG+RIYG
Sbjct: 131 PETVAAAKEAMRLTFFHWGLHAWAIYAIVALILAFFSYRHGLPLTLRSALYPIIGDRIYG 190

Query: 187 PIGHAVDIFAIIGTVLGVATSLGLGVTQINTGLNHLYGLPISVPVQIGLIIATTLLATVS 246
           P+GHAVDIFA+IGTV GVATSLG GV Q+N GLNHL+G+PI+  VQ+ LI+  T LAT+S
Sbjct: 191 PVGHAVDIFAVIGTVFGVATSLGYGVLQVNAGLNHLFGVPINETVQVILIVVITGLATIS 250

Query: 247 VVTGLDKGVRRLSELNLTLAALLLLMVLVAGPTVFILQTFVQNTGSYLSDIVDKTFNLYA 306
           VV+GLDKG+R LSELNL LA LLL +VL  GPTV +L++FV+NTG YLS++V KTFNLYA
Sbjct: 251 VVSGLDKGIRILSELNLGLALLLLALVLCLGPTVLLLKSFVENTGGYLSELVSKTFNLYA 310

Query: 307 YEP--NDWIGGWTLFYWGWWLAWSPFVGLFIARISRGRTIREFVAGVLLVPTAFTLLWMT 364
           YEP  ++W+GGWTL YWGWWL+WSPFVG+FIAR+SRGRTIREFV GVL VP  FTL+WMT
Sbjct: 311 YEPKSSNWLGGWTLLYWGWWLSWSPFVGMFIARVSRGRTIREFVTGVLFVPAGFTLMWMT 370

Query: 365 VFGDTAIHMILWEHVTSLGDAIEQDSSLALFAFLEHFPFSALISLIAIIMVVVFFVTSAD 424
           VFG++AI++I+ +  T L + ++QD +LALF FLEHFPFS+++S IA+ MV+VFFVTSAD
Sbjct: 371 VFGNSAIYLIMNQGATDLANTVQQDVALALFNFLEHFPFSSVLSFIAMAMVIVFFVTSAD 430

Query: 425 SGALVVDMLASGGKQGTPVWQRIFWAMSMGGVAIALLLADGLTALQTATIASALPFTIAL 484
           SGA+VVD LASGG   TPVWQRIFWA  MG VAIALLLA GL+ALQT TIASALPF++ L
Sbjct: 431 SGAMVVDTLASGGVANTPVWQRIFWASLMGIVAIALLLAGGLSALQTVTIASALPFSVIL 490

Query: 485 LCSMWGLLKALRLDATKQGLRYQALSTSPSAPRTAGGWQRRLRTLMLFPRRAHVVRFITE 544
           L S++GLLKALR D TK+     A + +P+A R    WQRRLR +   P+R+ V RF+ +
Sbjct: 491 LISIYGLLKALRRDLTKRESLSMA-TIAPTAARNPIPWQRRLRNIAYLPKRSLVKRFMDD 549

Query: 545 VVRPAYEDIAEEMRKQGYVVEISEGEDRRLRFEITHDGEPDFIYEVRPRAYAMPSF-VAT 603
           V++PA   + EE+ KQG +  IS+  D R+R E+    E +FIYEVR R Y  P+F +A 
Sbjct: 550 VIQPAMTLVQEELNKQGTISHISDAVDDRIRLEVDLGNELNFIYEVRLRGYISPTFALAA 609

Query: 604 SDDDER--EERKYFRAEVHLKEGGQDYDVMGWSREDVISDILGQYEKHMHFLHMVR 657
            D+DE+  E+ +Y+RAEV+LKEGGQ+YDVMGW++E +I+DIL QYEKH+HFLH+VR
Sbjct: 610 MDNDEQQTEQHRYYRAEVYLKEGGQNYDVMGWNQEQLINDILDQYEKHLHFLHLVR 665