Pairwise Alignments

Query, 304 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

Subject, 299 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score =  166 bits (420), Expect = 6e-46
 Identities = 99/261 (37%), Positives = 146/261 (55%), Gaps = 3/261 (1%)

Query: 3   ELAQLRCFTTLASELNFRRAAERLNMTQPPLSRQIQLLEHQLGVALFTRSTRSVALTAAG 62
           EL  LR F  +A EL+F RAA++L ++QPPLS+QIQ LE +LG  LF R+ R V L+ AG
Sbjct: 2   ELRHLRYFIAVAEELHFGRAAQQLGISQPPLSQQIQALEQELGARLFDRTNRRVELSEAG 61

Query: 63  RAFFVEAQALLDQAHRAAQGARLAALGESGSLTISFVASAVY-DFLPRAITQVRRERPGV 121
           R F  EA+ +L Q  +AA  AR A LGE G + I F +SA +   +P+AI   R+  P V
Sbjct: 62  RLFLEEARQVLAQVEKAADVARRAQLGELGEMKIGFTSSAPFTSKIPKAIHAFRQRFPAV 121

Query: 122 AINLLETTTFEQLQALRARRVDLAVVREPLRQPGLVSECLLREPFVLATPADHPLAQ--H 179
            +NL E ++ +  + +    +++ ++R      GLV+  L REP V    A HPLA+   
Sbjct: 122 HLNLKEMSSRDVAEGVFDESIEVGLMRPMPLPEGLVATELFREPLVAVINASHPLAEGTE 181

Query: 180 PAPMLEMLHGEPFILYAHGAWQPFNELHTGLFRASGIQPEFVQSLGSTLTILSLVNAGLG 239
               +  L  EPF+ +        +     L R +G  P F Q  G  +TI+ LV+AGLG
Sbjct: 182 QGVYMAALAPEPFVFFPRSYGSGLHAQLLSLARHAGFSPHFAQEAGEAMTIIGLVSAGLG 241

Query: 240 LALVPRGASAIRFQQVRFREL 260
           ++++P     +R + V +R L
Sbjct: 242 VSVLPASFQRMRIEGVVYRTL 262