Pairwise Alignments

Query, 809 a.a., penicillin-binding protein, 1A family from Pseudomonas stutzeri RCH2

Subject, 774 a.a., penicillin-binding protein from Pseudomonas simiae WCS417

 Score =  157 bits (398), Expect = 2e-42
 Identities = 112/394 (28%), Positives = 187/394 (47%), Gaps = 56/394 (14%)

Query: 419 QAQAALVSLDPQDGSIEALAGGFSFGQSNYNRAIQAKRQPGSSFKPFIYSAALD--AGYT 476
           + +AA+V  +P+ G ++A+ G      + +NRA+ A R  GS  KP +Y  AL+  + YT
Sbjct: 425 EVEAAMVVTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSLVKPAVYLTALEKPSKYT 484

Query: 477 AASLVNDSPIVFVEQGMDRIWRPKNDNNTFLGPIRMREALYKSRNLVSIRLLQTMGIDHT 536
             S ++D P+  V+ G  ++W P+N +    G + + + +  S N+ + RL   +G+ + 
Sbjct: 485 LTSWLSDDPL-SVKGGDGQVWTPQNFDRRSHGTVFLYQGIAHSYNISTSRLGLEVGVPNV 543

Query: 537 VDYISRFGFNLQDLPRNLSLALGTATLTPMEIATGWTTFANGGYKIEPYLIQRIEDREGN 596
           +  I+R G   ++ P   S+ LG   +TPME+AT + T ANGG+      I+ +   EG 
Sbjct: 544 LKTIARLGVT-REFPAFPSILLGAGAMTPMEVATMYQTLANGGFNTPMRGIRSVLTAEG- 601

Query: 597 LVFEANPARVPPPDDQPAAAVADTFAAPPSRALDTDESTDAGPRYAEQVLDERTAYIMTS 656
                                               E     P   +Q  D  + Y++ +
Sbjct: 602 ------------------------------------EPLKRYPFQIQQRFDAGSIYLIQN 625

Query: 657 MLQDVIKRGTGRRALAM--GRNDIAGKTGTTNDSIDSWFSGYNADIVTTVWAGFDQPQSL 714
            +Q V++ GTGR   ++      +AGKTGT+NDS DSWF+G+  D++  VW G D     
Sbjct: 626 AMQRVMREGTGRSVYSVLPANLTLAGKTGTSNDSRDSWFAGFGQDVLAVVWLGRDDN--- 682

Query: 715 GRNEY-GGTVALPIWMTFMSAVLKDMPEHPPAEPNGLLKLRIDPVSGRAATPGTPDAYFE 773
           G+  + G T AL +W +FM      +P + P +P+ +++  IDP +G+ +    P A   
Sbjct: 683 GKTPFTGATGALQVWTSFMRKA-DPLPLNMP-QPDNIVQAWIDPHTGQGSDANCPGAVQM 740

Query: 774 VFKSEDSPPPMGEVDPGYQAPGSPLPADEAAPLD 807
            +     PPP         A G   PAD  + +D
Sbjct: 741 PYIRGSEPPPGA-------ACGGSAPADAESVMD 767



 Score =  135 bits (341), Expect = 7e-36
 Identities = 78/260 (30%), Positives = 136/260 (52%), Gaps = 5/260 (1%)

Query: 69  IRFEDIPQEFIQALLAAEDDNFANHYGVDITGLMRAATQLLKSGQIQTGGSTITMQVAKN 128
           I+ + +P   ++ L+A ED +F +H+GV    + RA       G++  GGST+T Q+ KN
Sbjct: 171 IKLDQVPPYLLETLVAVEDRDFYHHWGVSPKSIARAVWVNTSGGKMTQGGSTLTQQLVKN 230

Query: 129 YFLTSERSFSRKINEILLALQIERELSKNEILELYVNKIYLG----NRAYGIEAASQVYY 184
           ++LT+ERS +RK+ E ++A+ +E   SK EILE Y+N++++G       +G   ASQ ++
Sbjct: 231 FYLTNERSLTRKLTEAMMAMLLELHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQFFF 290

Query: 185 GKSISELSVAQLAMIAGLPKAPSAFNPVVNPARSKERRDWILGRMFRLGSLDESSYRQAL 244
           G+ +SEL + Q+A++ G+ K PS +NP  NP R+ ERR+ +L  + + G         A 
Sbjct: 291 GQPLSELKLHQVALLVGMVKGPSYYNPRRNPERALERRNLVLDVLEQQGVATAEQVAAAK 350

Query: 245 AEPETARYHGAAPELDASYIAEMARAEMVGRFGSAAYT-DGFRVQTTVSSERQVAANNAL 303
             P      G   +       ++ + ++   +     T +G R+ T+     Q+ A  ++
Sbjct: 351 KMPLGVTTRGKLADSSFPGFIDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKAEASV 410

Query: 304 NSGLIEYDQRHGYRGPEARL 323
           N        R G    EA +
Sbjct: 411 NDTFKRLTGRKGSDEVEAAM 430