Pairwise Alignments

Query, 809 a.a., penicillin-binding protein, 1A family from Pseudomonas stutzeri RCH2

Subject, 832 a.a., bifunctional glycosyl transferase/transpeptidase from Dickeya dianthicola ME23

 Score =  143 bits (360), Expect = 4e-38
 Identities = 96/287 (33%), Positives = 145/287 (50%), Gaps = 11/287 (3%)

Query: 51  YSADDKLIAEF----GEMRRSPIRFEDIPQEFIQALLAAEDDNFANHYGVDITGLMRAAT 106
           +  D KLI       GE R   ++    P   +Q L+A ED +F  H G+    + RA  
Sbjct: 196 FRLDPKLITMLQSPNGEQRLF-VQRSGFPDLLVQTLIATEDRHFYEHDGISFYSIGRALI 254

Query: 107 QLLKSGQIQTGGSTITMQVAKNYFLTSERSFSRKINEILLALQIERELSKNEILELYVNK 166
             L +G+   GGST+T Q+ KN FLT+ERS  RK NE  +AL ++   SK+ ILELY+N+
Sbjct: 255 ANLTAGRAVQGGSTLTQQLVKNLFLTNERSLWRKANEAYMALIMDYRYSKDRILELYLNE 314

Query: 167 IYLG----NRAYGIEAASQVYYGKSISELSVAQLAMIAGLPKAPSAFNPVVNPARSKERR 222
           +YLG    ++  G   AS  Y+G+ ++ELS+ Q AM+ G+ K  S +NP  NP  + ERR
Sbjct: 315 VYLGQSGNDQIRGFPLASLYYFGRPVNELSLDQQAMLVGMVKGASLYNPWRNPQVTLERR 374

Query: 223 DWILGRMFRLGSLDESSYRQALAEPETARYHGAAPELDASYIAEMARAEMVGRFGSAAY- 281
           + +L  +     +DE  Y    A P   +  G       +++ +M R E+  R G     
Sbjct: 375 NLVLKLLQNQQVIDEDLYNMLSARPLGVQPKGGVISPQPAFM-QMVRQELQQRLGDKVND 433

Query: 282 TDGFRVQTTVSSERQVAANNALNSGLIEYDQRHGYRGPEARLADVPR 328
             G ++ TT+    Q AA  A+  G+       G +  E+ +  V R
Sbjct: 434 LSGVKIFTTLDPVSQDAAEKAVEDGIPALRAARGVKDLESAMVIVDR 480



 Score =  132 bits (332), Expect = 8e-35
 Identities = 85/296 (28%), Positives = 139/296 (46%), Gaps = 41/296 (13%)

Query: 417 VPQAQAALVSLDPQDGSIEALAGGFSFGQSNYNRAIQAKRQPGSSFKPFIYSAALDAG-- 474
           V   ++A+V +D   G I A+ GG     + +NRA+QA+R  GS  KP  Y  AL     
Sbjct: 468 VKDLESAMVIVDRFSGEIRAMVGGSDAQFAGFNRAMQARRSVGSLAKPPTYLTALSMPDR 527

Query: 475 YTAASLVNDSPIVFVEQGMDRIWRPKNDNNTFLGPIRMREALYKSRNLVSIRLLQTMGID 534
           Y   +++ D PI  ++Q    +W PKN +  F G + + +AL  S N+ ++ L   +G+D
Sbjct: 528 YRLNTILADEPIS-LKQPNGTVWEPKNYDREFRGRVMLVDALTNSLNVPTVNLGMAVGLD 586

Query: 535 HTVDYISRFGFNLQDLPRNLSLALGTATLTPMEIATGWTTFANGGYKIEPYLIQRIEDRE 594
              D + + G     +    ++ LG  +LTPME+A  + T A+GG +     ++ +   +
Sbjct: 587 QVSDTLQKLGIPQNQIQAVPAMLLGAVSLTPMEVAQEYQTIASGGNRASLSALRSVIAED 646

Query: 595 GNLVFEANPARVPPPDDQPAAAVADTFAAPPSRALDTDESTDAGPRYAEQVLDERTAYIM 654
           G +++++ P                                      AE+ +  + AY+ 
Sbjct: 647 GKVLYQSFP-------------------------------------QAERAVPSQAAYLT 669

Query: 655 TSMLQDVIKRGTGRR-ALAMGRNDIAGKTGTTNDSIDSWFSGYNADIVTTVWAGFD 709
              +Q V++RGT R   +  G   +AGKTGTTND  DSWF+G +   V   W G D
Sbjct: 670 LYGMQQVVERGTSRSLTVKFGNYHLAGKTGTTNDLRDSWFAGVDGKEVAITWVGRD 725