Pairwise Alignments

Query, 426 a.a., TRAP transporter, DctM subunit from Pseudomonas stutzeri RCH2

Subject, 426 a.a., D-glucuronate / D-galacturonate TRAP transporter, large permease component (from data) from Pseudomonas putida KT2440

 Score =  731 bits (1887), Expect = 0.0
 Identities = 369/426 (86%), Positives = 404/426 (94%)

Query: 1   MDAVVLLGSFIVLILLRVPVAYSLGLATLVGAWWIDIPLHAVMIQIAGGVNKFSLLAIPF 60
           M+A +LLGSFIVLIL+ +PVAY+LGL+ L+GAWWIDIPL A+MIQ+A GVNKFSLLAIPF
Sbjct: 1   MEAFILLGSFIVLILIGMPVAYALGLSALIGAWWIDIPLQAMMIQVASGVNKFSLLAIPF 60

Query: 61  FVLAGAIMAEGGMARRLVAFAGVLVGFVRGGLSLVNITASTFFGAISGSSLADTASVGSV 120
           FVLAGAIMAEGGM+RRLVAFAGVLVGFVRGGLSLVNI ASTFFGAISGSS+ADTASVGSV
Sbjct: 61  FVLAGAIMAEGGMSRRLVAFAGVLVGFVRGGLSLVNIMASTFFGAISGSSVADTASVGSV 120

Query: 121 LIPEMEKKGYPREFSTAVTISGSVQALLTPPSHNSVIYSLAAGGTVSIAALFVAGIGPGL 180
           LIPEME+KGYPREFSTAVT+SGSVQALLTPPSHNSV+YSLAAGGTVSIA+LF+AGI PGL
Sbjct: 121 LIPEMERKGYPREFSTAVTVSGSVQALLTPPSHNSVLYSLAAGGTVSIASLFMAGIMPGL 180

Query: 181 LLSATMATLCLLFARKRNYPKGEVVPLRQALKICVEALWGLMTMVIILGGILSGVFTATE 240
           LLSA M  LCL+FA+KRNYPKGEV+PLR+ALKI  EALWGLM MVIILGGILSGVFTATE
Sbjct: 181 LLSAVMMGLCLIFAKKRNYPKGEVIPLREALKIAGEALWGLMAMVIILGGILSGVFTATE 240

Query: 241 SAAVAVVWAFFVTMFIYRDYKWSELPRMLHRTVRTLSIVMILIAFAASFGYIMTLMQIPS 300
           SAAVAVVW+FFVTMFIYRDYKW +LP+++HRTVRT+SIVMILI FAASFGY+MTLMQIPS
Sbjct: 241 SAAVAVVWSFFVTMFIYRDYKWRDLPKLMHRTVRTISIVMILIGFAASFGYVMTLMQIPS 300

Query: 301 KITTAFLALSDNRYVILMCINFMLLVLGTLMDMAPLILILTPILLPVVVSFGVDPVHFGM 360
           KITTAFL LSDNRYVILMCINFML++LGT+MDMAPLILILTPILLPV+   GVDPVHFGM
Sbjct: 301 KITTAFLTLSDNRYVILMCINFMLMLLGTVMDMAPLILILTPILLPVITGIGVDPVHFGM 360

Query: 361 IMLVNLGIGLITPPVGAVLFVGAAIGKVTIENTVKALLPFYAALFAVLMAVTYIPMISLW 420
           IMLVNLGIGLITPPVGAVLFVG+AIGKV+IE+TVKAL+PFY ALF VLMAVTYIP ISLW
Sbjct: 361 IMLVNLGIGLITPPVGAVLFVGSAIGKVSIESTVKALMPFYLALFLVLMAVTYIPAISLW 420

Query: 421 LPSVVL 426
           LPSVVL
Sbjct: 421 LPSVVL 426