Pairwise Alignments

Query, 343 a.a., Spermidine/putrescine-binding periplasmic protein from Pseudomonas stutzeri RCH2

Subject, 362 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score = 53.5 bits (127), Expect = 8e-12
 Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 31/220 (14%)

Query: 123 FVWSTV-LAYNADKLKSAPA-----SWADFWDTEKFPGKRGLRKGAKYTLEFALMADGV- 175
           ++W T  + YN DK+K+A       SWA  ++ E       L+K  +  + F    D + 
Sbjct: 127 YLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPEN------LKKLKQCGVAFMDSPDELF 180

Query: 176 PVKDVYKVL---ATKDGQN-RAFRKLDQLKPNIQWWEAGAQPPQFLASGDVVMSSAYNGR 231
           P    Y  +   + K G   +A  +L +L+P I ++ +       LA+GDV ++  Y+G 
Sbjct: 181 PAVLNYLGMDPRSEKPGDYAKAEARLLELRPYITYFHSSKYVSD-LANGDVCIAFGYSGD 239

Query: 232 I-----AAVQNESNLQIVWS----GGIYDFDSWAIPKGAKSQEQARKFIAFTVEPQQQKA 282
           +      AV+ ++ +++ +S    G    FD  AIPK A + EQA  FI + ++P+    
Sbjct: 240 VFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLDPKVIAK 299

Query: 283 YAENIAYGPANTQAVSLLDEKRLAQMPTAPENIADQVAMD 322
            +  + Y  AN  A + +D    A +   PE    Q  +D
Sbjct: 300 VSATVGYANANPDAKAYMD----ASLVNNPEIYPPQEVLD 335