Pairwise Alignments

Query, 417 a.a., ABC-type spermidine/putrescine transport system, permease component I from Pseudomonas stutzeri RCH2

Subject, 303 a.a., Putrescine transport system permease protein PotH (TC 3.A.1.11.2) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  167 bits (424), Expect = 3e-46
 Identities = 83/218 (38%), Positives = 129/218 (59%), Gaps = 3/218 (1%)

Query: 192 QAVYLDIFARTFWMGLVITVICLLLAYPLAYLLANLPARQSNLLMILVLLPFWTSILVRV 251
           + +Y+D + R+ W  L   V+CL + YP AY +A  PA     L+++V+LPFWTS L+RV
Sbjct: 79  RTLYIDAYLRSIWYALCTAVLCLAIGYPFAYFIARSPASIRPALLLMVMLPFWTSFLLRV 138

Query: 252 AAWIVLLQSGGLINGALLKMGLIDEPLQLVFNRTGVYIAMVHILLPFMILPIYSVMKNIS 311
            AW  +L   G++N  L+ +GLI EP+ +++    + I M ++ LPFMILP+Y+ +  + 
Sbjct: 139 YAWKGILADQGVLNRLLMSIGLISEPIPMLYTNVSMLIGMTYVYLPFMILPLYANLVKMD 198

Query: 312 PSYMRAAVSLGCHPFASFWRVYFPQTLAGVGAGCLLVFIISIGYYITPALLGSPNDQMVS 371
              + AA  LG  PF +FW +  P + AG+ AG +LVFI  +G ++ P+LLG P + M+ 
Sbjct: 199 FRLLEAAYDLGTSPFKAFWLITVPLSKAGIIAGFMLVFIPCVGEFVIPSLLGGPENLMIG 258

Query: 372 YFVAFYTNTTINWGMATALGGL---LLLATMLLYVIYS 406
             V     T  +W  ATAL  +   L++  + LY  YS
Sbjct: 259 RVVWDEMFTANDWPRATALAVVMIALIVIPLALYYHYS 296