Pairwise Alignments

Query, 296 a.a., rarD protein from Pseudomonas stutzeri RCH2

Subject, 295 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  414 bits (1065), Expect = e-120
 Identities = 197/293 (67%), Positives = 238/293 (81%)

Query: 1   MATANLRKGYLLGLATFSIWGMFPLYFKALEQYGALEIVTQRVIWSAVFGSLVLLVWRHP 60
           M  AN R+GY+LGL+ + IWG+FPLYFKA++   A+EI+  RV+WSA+FGSL+LLVW+HP
Sbjct: 1   MHAANPRRGYILGLSAYIIWGLFPLYFKAIQSVPAVEIIVHRVLWSALFGSLLLLVWKHP 60

Query: 61  GWWRELLAHPRRLGVLGISSVLIAANWLIYVWAVNHDRMVEASLGYYINPLVNVLLGMLV 120
           GWWREL  +PRRLG+L +S  LIA NWL YVW+VN+ RM+EASLGYYINPL+NVLLGML+
Sbjct: 61  GWWRELRNNPRRLGILALSGALIAGNWLTYVWSVNNGRMLEASLGYYINPLINVLLGMLI 120

Query: 121 LRERLRPLQWLAVAMATVGVSLQLLMLGEFPWISIVLALSFGSYGLLRKLAPVAALPGLV 180
           L ERLR LQWLAV MA VGV+ Q+  +G  PW+S+VLALSFG YGL+RK APVAALPGLV
Sbjct: 121 LGERLRRLQWLAVGMAAVGVAQQVWQVGSLPWVSLVLALSFGFYGLIRKQAPVAALPGLV 180

Query: 181 VETWMLLPVALVWLFWFSSGTSTEPAFWTSSDALWLMAAGPVTLIPLLGFNAAARHLPYS 240
           VETWML+P+AL WL    +  S + AF+TSS+ALWLMAAGPVTL+PL+ FNAAARHLPY+
Sbjct: 181 VETWMLVPLALGWLLLHPTAMSAQGAFYTSSEALWLMAAGPVTLVPLVCFNAAARHLPYT 240

Query: 241 TLGFLQYLTPTLLLILAVQLFGEPFPVDRQLAFFCIWAGLAVYSLDAWRIMRK 293
           TLGFLQYL PTL+L+ AV LF E        AF  IWAGLA+YS+DAW  +RK
Sbjct: 241 TLGFLQYLAPTLVLLQAVVLFDEHLSSSTLAAFMFIWAGLAIYSVDAWLNLRK 293