Pairwise Alignments

Query, 540 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 716 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  203 bits (517), Expect = 2e-56
 Identities = 127/368 (34%), Positives = 196/368 (53%), Gaps = 8/368 (2%)

Query: 176 VETREANANTTRLGIILSLVLVILVSLGAWLVIRSVMVNIRGVIASLQSIARGDGDLTQR 235
           ++ R    +   LG  L L+  I+  L  W++ RSV   I  V   L+ IA GDG+LT R
Sbjct: 354 LDQRNTTGSLVELG--LGLLAAIVGLLFIWMMARSVTKPILRVAYMLRDIASGDGNLTLR 411

Query: 236 VNVESNDEIGAMIELFNSFLDKLQSTIRQI---IDAATPLGQVSKELYKLTQGSEENAKS 292
           +  E  DE+G ++  FNS LDKLQ TI ++   + AA      S  + + T    E    
Sbjct: 412 LAYEKQDELGELVAWFNSLLDKLQPTIAEVKRSVQAARATADESAAIARQTSNGMEEQSR 471

Query: 293 QQHHTDSITRDILTMTGSIQEVAQRSQQASDEANSAARQAATAREHVGSLSTGISDLGDS 352
           Q H   + +++   M  + Q+VA+ + QA+  A  A +        +G  ++ I  L   
Sbjct: 472 QVHLVVTASQE---MNATAQDVARSAAQAAKAACDADQATREGLSVIGRTTSSIDHLAAD 528

Query: 353 VMGAVKAMEQLEEETQEVGSVLTVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 412
           +  A+  +E L   ++++G VL VIRSIAEQTNLLALNAAIEAARAGE GRGFAVVADEV
Sbjct: 529 MSEAMSQVESLATHSEKIGMVLEVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEV 588

Query: 413 RNLAQKTAASTAEIQQIIQRLQNSANTVLNVMTSNGEKSRASIQRSIEATQLLETIARTV 472
           RNLA++T  S  E + +I+ LQ+   +V+  M+ +   +  S+ +  +A   L  I   V
Sbjct: 589 RNLARRTQESVEETRIVIEHLQSGTESVVTAMSKSQRLASGSVDQVSQAVTALSQIGDAV 648

Query: 473 NQIDELNAGIAQFTQEQIGLSSSIQQETQVLQQDAQATANGAEATARLGEQLVSTGDHLR 532
             I  +N  IA   +EQ  ++  I     +++   ++ ++ A  +AR+ + +    +  +
Sbjct: 649 TVITSMNLQIASAAEEQNAVAEEINCNISIIRDVTESMSDRASESARISDSIYKLANQQQ 708

Query: 533 AATGQFRV 540
               QFRV
Sbjct: 709 VLMNQFRV 716



 Score = 31.2 bits (69), Expect = 1e-04
 Identities = 47/269 (17%), Positives = 102/269 (37%), Gaps = 41/269 (15%)

Query: 83  AREVLQQIDTQQQSLAALLSDQRQQHQALGDWRKSVRDYADNALAASTKLIDGSASFDDL 142
           AR+    ++ Q + +  +++  ++ +    D  +S    A  A  A     +G +     
Sbjct: 459 ARQTSNGMEEQSRQVHLVVTASQEMNATAQDVARSAAQAAKAACDADQATREGLSVIGRT 518

Query: 143 RPSLDRMASDLAQAQKLGSDFRAQAYDSFQQTLVETREANANTTRLGIILSLVLVILVSL 202
             S+D +A+D+++A                  + +      ++ ++G++L ++  I    
Sbjct: 519 TSSIDHLAADMSEA------------------MSQVESLATHSEKIGMVLEVIRSIAEQT 560

Query: 203 GAWLVIRSVMVNIRGVIASLQSIARGDGDLTQRVNVESNDEIGAMIELFNSFLDKL---- 258
               +  ++     G      ++   +     R   ES +E   +IE   S  + +    
Sbjct: 561 NLLALNAAIEAARAGEAGRGFAVVADEVRNLARRTQESVEETRIVIEHLQSGTESVVTAM 620

Query: 259 -------QSTIRQIIDAATPLGQV--------SKELYKLTQGSEENAKSQQHHTD-SITR 302
                    ++ Q+  A T L Q+        S  L   +   E+NA +++ + + SI R
Sbjct: 621 SKSQRLASGSVDQVSQAVTALSQIGDAVTVITSMNLQIASAAEEQNAVAEEINCNISIIR 680

Query: 303 DILTMTGSIQEVAQRSQQASDEANSAARQ 331
           D+   T S+ + A  S + SD     A Q
Sbjct: 681 DV---TESMSDRASESARISDSIYKLANQ 706