Pairwise Alignments

Query, 947 a.a., excinuclease ABC, A subunit from Pseudomonas stutzeri RCH2

Subject, 943 a.a., UvrABC system protein A from Acinetobacter radioresistens SK82

 Score = 1330 bits (3442), Expect = 0.0
 Identities = 655/940 (69%), Positives = 784/940 (83%), Gaps = 4/940 (0%)

Query: 4   ILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63
           I IRGARTHNLKN+ L +PRDK +VITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ
Sbjct: 6   IRIRGARTHNLKNVSLDIPRDKFVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 65

Query: 64  FLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPRCPDH 123
           FLS MEKP+VD IEGLSPAI+IEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTP CP+H
Sbjct: 66  FLSQMEKPEVDAIEGLSPAIAIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPYCPEH 125

Query: 124 DAPLEAQTVSQMVDQVLALPEGRKLMLLAPVIRERKGEHLAVFDELRAQGFVRARVNGRL 183
           D P+ AQTVS+MVD V ALPEG  LMLLAPV+RERKGE+  +F++L++QGFVRARV+G +
Sbjct: 126 DLPMVAQTVSEMVDAVKALPEGTALMLLAPVVRERKGEYSTLFEQLQSQGFVRARVDGEI 185

Query: 184 YELDELPKLDKQKKHSIDVVVDRFKVRGDLQQRLAESFETALKLADGIALVASMEEEDES 243
            E+D  P+LDK+KKH+I+V+VDRFKVR DL  R+AESFETAL+L   +A+++ M+  DE 
Sbjct: 186 IEIDTPPELDKKKKHTIEVIVDRFKVRDDLGNRIAESFETALRLGGDLAVLSWMK--DEH 243

Query: 244 EEMIFSARFACPICGHSISELEPKLFSFNNPAGACPTCDGLGVKQFFDAKRLV-NGELTL 302
            + +FSA+ +CP C  ++ +LEP+LFSFNNP GACP CDGLG +  F A +L+ N EL++
Sbjct: 244 PDRVFSAKHSCPDCDRAVGDLEPRLFSFNNPFGACPACDGLGTRSHFSADKLIHNPELSI 303

Query: 303 AEGAIRGWDRRNVYYFQMLGSLASHYGFSLDEPFDSLAADHQKSILRGSGRESVEFRYLN 362
           ++GAIRGWDR+  YY+ ML  +A+HY +SL+ P+  L  D QK  L G+GRE ++  Y++
Sbjct: 304 SQGAIRGWDRQRPYYYSMLQKVAAHYDYSLETPWKDLGKDIQKKFLYGTGREKIDLSYVD 363

Query: 363 DRGDIVKRSHPFEGIIPNLERRYRETESNSVREELAKYLSTQPCPDCRGTRLRREARHVW 422
           +RG    R  PFEG++P+LERRYRETESN VR++L++YLS   C  C G+RL   +R+V 
Sbjct: 364 ERGRRHNRVMPFEGVLPHLERRYRETESNYVRDDLSQYLSNAACDVCDGSRLNEISRNVK 423

Query: 423 VGDRTLPAVTAMPIGDATDYFGGLSLSGRRGEIADKILKEIRERLQFLVNVGLDYLTLDR 482
           + D T+  +T M IGDA  Y+  L L G +GEI DKI KEIRERL FLV+VGL+YL+L R
Sbjct: 424 ILDHTISQITRMSIGDAAHYYEHLHLEGAKGEIGDKIFKEIRERLHFLVSVGLNYLSLAR 483

Query: 483 SADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNERLLGTLRHLRDIGNTVI 542
           SA+TLSGGEAQRIRLASQIGAGL+GVMY+LDEPSIGLHQRDN+RLL TL  LRD+GNTV+
Sbjct: 484 SAETLSGGEAQRIRLASQIGAGLMGVMYVLDEPSIGLHQRDNDRLLQTLIRLRDLGNTVL 543

Query: 543 VVEHDEDAIRLADYVVDIGPGAGVHGGRIVAEGTPDEVMAHPDSLTGKYLSGRVKINYRP 602
           VVEHDEDAIR AD+++DIGPGAGVHGG ++AEGT DE+  H DSLTGKYLSG +KI    
Sbjct: 544 VVEHDEDAIRAADHIIDIGPGAGVHGGYVIAEGTADELCQHKDSLTGKYLSGELKIAVPQ 603

Query: 603 ERTRRD-PKKLLKLKGARGNNLRNVDLEIPVGLLTCITGVSGSGKSTLINNTLFPITATA 661
           +R +   P+K +KL GA G+NL+NVDL IP+G++TC+TGVSGSGKSTLIN TL P+ AT 
Sbjct: 604 QRVQPPKPEKQIKLLGASGHNLKNVDLTIPLGVMTCVTGVSGSGKSTLINRTLLPLAATQ 663

Query: 662 LNGASTLEVAPHDSFDGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPEA 721
           LNGA+TL     DS DGLQ LDKVVDIDQSPIGRTPRSNPATYTG+FTPIRELFA   EA
Sbjct: 664 LNGATTLTPEKFDSIDGLQFLDKVVDIDQSPIGRTPRSNPATYTGVFTPIRELFAQTQEA 723

Query: 722 RSRGYGPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDVCKGKRYNRETLEVKYK 781
           ++RGY  GRFSFNVKGGRCEAC+GDG+IKV MHFLPD+YVPCD C GKRYNRETLEV YK
Sbjct: 724 KARGYSAGRFSFNVKGGRCEACEGDGMIKVAMHFLPDMYVPCDACHGKRYNRETLEVGYK 783

Query: 782 GKSITEVLDMTIEEAREFFDPVPAVARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLS 841
           GK+I++VL+MT+E+A  FF+ +P + R+L+TL  VGL YI+LGQSATTLSGGEAQRVKL+
Sbjct: 784 GKNISDVLEMTVEDAAAFFEAIPVIHRRLETLTQVGLGYIRLGQSATTLSGGEAQRVKLA 843

Query: 842 RELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWL 901
           REL+KRDTGKTLY+LDEPTTGLHF DI +LLD+LH LR+ GNT+VVIEHNLDVIKTADW+
Sbjct: 844 RELAKRDTGKTLYVLDEPTTGLHFHDIAKLLDILHELRNKGNTIVVIEHNLDVIKTADWV 903

Query: 902 VDLGPEGGSKGGQIIACGTPEEVAGMAQSHTGHFLKPLLE 941
           VDLGPEGGS GGQIIA GTPEEVA +A SHTG FLKPLL+
Sbjct: 904 VDLGPEGGSGGGQIIATGTPEEVAEVAISHTGRFLKPLLK 943



 Score = 62.8 bits (151), Expect = 1e-13
 Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 6/123 (4%)

Query: 3   KILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62
           +I + GA  HNLKN+DLT+P   +  +TG+SGSGKS+L   TL      +   + +    
Sbjct: 614 QIKLLGASGHNLKNVDLTIPLGVMTCVTGVSGSGKSTLINRTLLPLAATQLNGATTLTPE 673

Query: 63  QFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPRCPD 122
           +F S      +D ++ L   + I+Q      PRS   T T ++  +R L+A+    +   
Sbjct: 674 KFDS------IDGLQFLDKVVDIDQSPIGRTPRSNPATYTGVFTPIRELFAQTQEAKARG 727

Query: 123 HDA 125
           + A
Sbjct: 728 YSA 730