Pairwise Alignments

Query, 235 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Pseudomonas stutzeri RCH2

Subject, 236 a.a., ABC transporter from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  350 bits (897), Expect = e-101
 Identities = 180/236 (76%), Positives = 201/236 (85%), Gaps = 1/236 (0%)

Query: 1   MTAPLLAIDSLGFAWPRQAELLDIPTFRLERGESLFLKGPSGSGKTTLLGLIGGVQKAGR 60
           MT  L+ +  L F WP   +LLDIP FRL+ GE+LFLKGPSGSGKTTLLGL+GGVQK   
Sbjct: 1   MTQALIELSDLRFNWPGHPQLLDIPEFRLQSGETLFLKGPSGSGKTTLLGLLGGVQKPVS 60

Query: 61  GSIRLLDHDLGRLSAGARDRFRVDHTGYIFQQFNLLPFLSVRENVGLPCHFSRLRAERAR 120
           GSIRLL+ DL  LS+ ARDRFRVDHTGYIFQQFNLLPFLSVREN+ LPCHFS +RAERAR
Sbjct: 61  GSIRLLNQDLSALSSAARDRFRVDHTGYIFQQFNLLPFLSVRENIELPCHFSSVRAERAR 120

Query: 121 KRHGSTDAAAASLLEHLGL-SPELFERRADALSIGQQQRVAAARALIGQPELVIADEPTS 179
           +RHGS + A A+LL HLGL  P +  RRAD+LSIGQQQRVAAARALIGQPELVIADEPTS
Sbjct: 121 QRHGSVEKATATLLAHLGLKDPAMLTRRADSLSIGQQQRVAAARALIGQPELVIADEPTS 180

Query: 180 ALDADSREAFLHLLFSECRAAGASLLFVSHDQSLAPLFDRSLSLAELNRAASNPEL 235
           ALDADSREAF+ LLF+ECR AGASLLFVSHDQSLAPLFDR+LSL++LNRAA   E+
Sbjct: 181 ALDADSREAFIRLLFAECREAGASLLFVSHDQSLAPLFDRNLSLSDLNRAAVAVEI 236