Pairwise Alignments

Query, 235 a.a., DNA polymerase III, alpha subunit (gram-positive type) from Pseudomonas stutzeri RCH2

Subject, 457 a.a., DNA repair nuclease with dnaQ and GIY-YIG domains (from data) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 42.7 bits (99), Expect = 1e-08
 Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 14/167 (8%)

Query: 42  VLDLETTGLHLKRDLVIAIGAVVIEDGAIDYSQQFECTLCRQVKVTESVL-IHGIAPSEL 100
           ++D+ETTG + KR  +  + AV      I     F+  +    ++   +  + GI  S +
Sbjct: 5   IVDIETTGGYGKRHRITEVAAVAHNGSQI--LDSFQTLINPDCEIPGFITGLTGIDQS-M 61

Query: 101 ANGLPP----AEALLSFMEFAAGSVILAFHAPFDQRMLGRALKRELGYTMDHTFLDVADL 156
             G P     A+ L +F+E     + +A +  FD + +    +R +G + D   L    L
Sbjct: 62  VEGAPYFEDIADELYAFLE---DKIFVAHNVNFDYQFIRSEFER-IGKSFDRPKLCTVRL 117

Query: 157 APMLFPEAMIHRGGLDHWLDYFNIHIPQRHNASADAMATAEIALILL 203
           +  +FP    +   L    ++ NI I  RH A  DA ATAE+   LL
Sbjct: 118 SRKIFPGLRSY--SLGRICEHKNIEIKSRHRAFGDAEATAELFTKLL 162