Pairwise Alignments

Query, 533 a.a., hypothetical protein from Pseudomonas stutzeri RCH2

Subject, 440 a.a., NarK/NasA family nitrate transporter from Rhodanobacter sp000427505 FW510-R12

 Score = 64.7 bits (156), Expect = 7e-15
 Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 9/157 (5%)

Query: 25  RNLWISIPSLLMGFAIWLMWGIVTVQMLN-LGFPFQPAELFTLTAIAGLTGATLRIPASF 83
           R LW+S  +  + FA+W ++ I+ +Q+   LG       L   T I  LTG+ +R+    
Sbjct: 14  RALWLSTFAFTVCFAVWTIFSIIGIQIKQQLGLNETQFGLLIATPI--LTGSLIRLLLGI 71

Query: 84  MIRIAGGRNTIFLTTALLMIPAAGAGLALQSQDTPLWVFQLLAFLSGIGGGNFACSMSNI 143
                GG        A +M+ AA A   L    T    F + A   GI GG F+  ++ +
Sbjct: 72  WADQYGGHRVF----AAVMLCAAVATWMLGYAHT-YPQFLVAALFVGIAGGAFSVGVAYV 126

Query: 144 STFFPKNQQGLALGLNAGLGNFGVTTMQILIPLVMTA 180
           S +FP ++QG ALG+  G GN G    ++L P+VM A
Sbjct: 127 SKWFPASRQGTALGI-FGAGNVGAAVTKLLAPMVMVA 162



 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 68/310 (21%), Positives = 116/310 (37%), Gaps = 37/310 (11%)

Query: 204 ISAGTETWIQNAGWVWLLFLVPLAFAGWFG-MNNLLVISPTPGYPLNAFGKILGLYGVAF 262
           + A   TW+      +  FLV   F G  G   ++ V   +  +P +  G  LG++G   
Sbjct: 87  LCAAVATWMLGYAHTYPQFLVAALFVGIAGGAFSVGVAYVSKWFPASRQGTALGIFGAGN 146

Query: 263 VAAALGLYL---YLPAPTGLGVLNMWGVMLLTIGLTLGML---------RMLPGSIKPNI 310
           V AA+   L    + A   + V  +W + L    +   +          R   G+   + 
Sbjct: 147 VGAAVTKLLAPMVMVAAGWIMVSKIWAIALALTAVLFYLFSREDPSLAQRRKSGTKPMSF 206

Query: 311 KRQFTIFRDKHTWSMSILYILTFGSFIGFSMALPLSITVIFGFMNEVAADGTVTRIANPN 370
           + Q    R+   W  S+ Y   FG F+  ++ LP  +T ++    +V   G +    +  
Sbjct: 207 REQMMPLRNLQVWRFSLYYFFVFGGFVALALWLPHFLTGVYKL--DVRTAGILAAFYSIP 264

Query: 371 APSALTYAWIGPFIGALIRPLGGWISDKVGG-SIVTQVISVVMVGASVAAGYVMQQAYGS 429
           A              +L R +GG +SD++G   ++     V  +   + A    Q     
Sbjct: 265 A--------------SLFRIVGGVLSDRIGARRVMYWTFGVSAICTFLLAYPDTQYVVKG 310

Query: 430 AQPEEYFFL------FLVLFLVLFAASGIGNGSTFRTIGVIYDREKAGPVLGWTSAVAAY 483
            + +    L      F VL  VL     +G  + ++ I V Y  +  G V G    +   
Sbjct: 311 IRSDITLHLATGVVPFTVLVFVLGFFMSLGKAAVYKHIPVYYP-QHVGSVGGVVGMIGGL 369

Query: 484 GSFVAPIVIG 493
           G FV PI  G
Sbjct: 370 GGFVLPIAFG 379



 Score = 28.5 bits (62), Expect = 5e-04
 Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 29/146 (19%)

Query: 385 GALIRPLGGWISDKVGGSIVTQVISVVMVGASVAAGYVMQQAYGSAQPEEYFFLFLVLFL 444
           G+LIR L G  +D+ GG    +V + VM+ A+VA   +    Y    P+   FL   LF+
Sbjct: 62  GSLIRLLLGIWADQYGGH---RVFAAVMLCAAVATWML---GYAHTYPQ---FLVAALFV 112

Query: 445 VLFAASGIGNGSTFRTIGVIY-----DREKAGPVLGWTSA---VAAYGSFVAPIVIGEQV 496
                 GI  G+   ++GV Y        + G  LG   A    AA    +AP+V+   V
Sbjct: 113 ------GIAGGAF--SVGVAYVSKWFPASRQGTALGIFGAGNVGAAVTKLLAPMVM---V 161

Query: 497 KAGTPEVAMYGFAVFYALCLILNWWF 522
            AG   V+   +A+  AL  +L + F
Sbjct: 162 AAGWIMVSKI-WAIALALTAVLFYLF 186