Pairwise Alignments

Query, 732 a.a., hypothetical membrane protein, TIGR01666 from Pseudomonas stutzeri RCH2

Subject, 727 a.a., YccS/YhfK family integral membrane protein from Pseudomonas simiae WCS417

 Score = 1052 bits (2720), Expect = 0.0
 Identities = 520/726 (71%), Positives = 605/726 (83%), Gaps = 1/726 (0%)

Query: 1   MPQPSLSQSLRRLWALEKFGYSLRVLIAMAGSMGLSWYLGQPTLIIPLFLGIIASALAET 60
           M   S  QS+RRLWAL+KF YS+RV IA+ GSM L WY  + TL+IPLFLGIIASALAET
Sbjct: 1   MSSTSFKQSMRRLWALDKFSYSIRVFIALTGSMALCWYQDEMTLLIPLFLGIIASALAET 60

Query: 61  DDSWLGRLNALLVTLLCFSIAAVAVELLFPYPWLFVAGLAVSTFALVMLGALGERYGAIA 120
           DDSW GRLNAL VTL+CFSIAA++VELLFPYPW+F   LA++TF L MLGALGERYGAIA
Sbjct: 61  DDSWQGRLNALAVTLVCFSIAALSVELLFPYPWIFAISLALATFCLTMLGALGERYGAIA 120

Query: 121 QATLILAIYSMIAADQRNGELQHFWRDPLLLVAGAAWYGLLSVCWNALFAHQPVQQSLAR 180
            ATLIL++Y+MI  DQR G +  FW +PLLLVAGAAWYG LSV W ALF++QPVQQSLAR
Sbjct: 121 SATLILSVYTMIGVDQRGGAVSDFWHEPLLLVAGAAWYGALSVLWQALFSNQPVQQSLAR 180

Query: 181 LYRELGLYFRYKAALFEPVRQLDVEQRRLELAQQNGRVVNALNAAKETLLHRLGNGRAGG 240
           L+RELG Y + K++LFEP+RQLDVE RRLELAQQNGRVV ALNAAKE +LHR+GNGR G 
Sbjct: 181 LFRELGRYLKLKSSLFEPIRQLDVEARRLELAQQNGRVVAALNAAKEIILHRVGNGRPGS 240

Query: 241 KINHYLKLYFLAQDLHERVSSSHYPYQALAEAFFHSDVLFRCQRLLRLQASACAELGETI 300
           K++ YLKLYFLAQD+HER SSSHYPY ALA+AFFHSDVLFRCQRLLR Q  AC  L E+I
Sbjct: 241 KVSRYLKLYFLAQDIHERASSSHYPYNALADAFFHSDVLFRCQRLLRQQGKACQTLAESI 300

Query: 301 QLRQAFRYSEANGQALEDLQASLEHLREQNNPAWRGLLRSLRALSGNLSTLQRQLASASD 360
           QLRQ F Y ++  +AL DL ASLEHLR Q+NPAWRGLLRSLRAL+ NLSTL R L  AS+
Sbjct: 301 QLRQPFIYDDSFAEALGDLNASLEHLRIQSNPAWRGLLRSLRALAANLSTLDRLLGDASN 360

Query: 361 PGTLEGEQDNSLLDRQPQTLREAFNRIRLQLTPTSLLFRHALRMTIALITGYAVLHAIHP 420
           P +L    D++LLDR P+ L+E + R+R Q+TPTSLLFRHALR+++AL  GY +LHAIH 
Sbjct: 361 PDSLADATDSNLLDRAPRNLKEMWTRLRTQMTPTSLLFRHALRLSLALTVGYGMLHAIHA 420

Query: 421 EQGYWVLLTTVFVCQPNYGATRIKLVQRISGTVLGLVAGWALFDLFPSQPIQALFAVVAG 480
            QGYW++LTT+FVCQPNYGATR KL QRI GT +GL   WALFDLFPS  +Q++FA+ AG
Sbjct: 421 SQGYWIILTTLFVCQPNYGATRRKLGQRIIGTAIGLTVAWALFDLFPSPLVQSMFAIAAG 480

Query: 481 VVFFATRSTRYTLATAAITLMVLFCFNQVGDGYGLIWPRLFDTLLGSLIAAAAVFLILPD 540
           +VFF  R+TRYTLATAAITLMVLFCFNQVGDGYGL  PRLFDTLLGSLIA  AVFL LPD
Sbjct: 481 LVFFINRTTRYTLATAAITLMVLFCFNQVGDGYGLFLPRLFDTLLGSLIAGLAVFLFLPD 540

Query: 541 WQGRRLNQVVANTLSCNSDYLRQIMRQYDSGKRDDLAYRLARRNAHNADAALSTTLSNML 600
           WQGRRLN+V+ANTL+CNS YLRQIM+QY +GK DDLAYRLARRNAHNADAALSTTL+NML
Sbjct: 541 WQGRRLNKVLANTLTCNSIYLRQIMQQYAAGKSDDLAYRLARRNAHNADAALSTTLANML 600

Query: 601 LEPGHFRKDAETGFRFLILSHTLLNYLSGLGAHRES-LPDDARDALLESAAQQLAASLDD 659
           +EPGHFRK+A+ GFRFL+LSHTLL+YLSGLGAHRE+ LP + R+ L+E A   LAAS+D+
Sbjct: 601 MEPGHFRKEADVGFRFLVLSHTLLSYLSGLGAHRETQLPAEVREHLIEGAGNTLAASIDE 660

Query: 660 LAAALAQNRPIAIYSEEEEALAQQLEQTPDEMDDAHRLVQTQLGLICRQLAPLRSMAVHL 719
           +A  LA  +PIAI S+ EEALA +LEQ PDE+D+  RLVQTQL LICRQL PLR++A HL
Sbjct: 661 IATGLANKQPIAIQSDAEEALAVELEQMPDEIDEGQRLVQTQLALICRQLGPLRTLAAHL 720

Query: 720 LKQQPA 725
           +K   A
Sbjct: 721 IKDTRA 726