Pairwise Alignments

Query, 288 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

Subject, 262 a.a., putative Periplasmic binding protein from Pseudomonas putida KT2440

 Score = 52.0 bits (123), Expect = 1e-11
 Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 9/243 (3%)

Query: 42  LRRLLGLILLLASASLP-AEVLRLAGNLWPPYT-DRSLPGEGLSVELIRTALGRGGYQVE 99
           + RL  ++LL+  + L   E LRL  + W PY    +    G+  E+      R G +VE
Sbjct: 4   IARLFWILLLVCLSPLALGERLRLVTDDWAPYVFQHNGQPRGIDYEVASQVFARLGVEVE 63

Query: 100 YIEVPWERALLGLRKGSYD-LVNGWPAVKRVDYSLSSRAFLINRMRWV--QRRGSGIRYD 156
           +  +PW+R L    +G  D +++ +    R  Y +   A  ++ + +V  Q R       
Sbjct: 64  WQFLPWKRCLAMAEQGLADGILDIFQTDARQPYMVYG-AEPMSEVEFVLFQSRSRRHAVT 122

Query: 157 GLDSLTGYLLVLSRGYTYSDELDADTRLQKGYAANFVQAATMVLAGRADLTLEDERTALF 216
            LD L G  +  S GY Y          ++  A         ++ GR DL + D R    
Sbjct: 123 HLDDLAGLTVGTSPGYAYGKGFTEAPHFKREAAPTQEANFGKLILGRIDLVITDRRVG-H 181

Query: 217 HFERELGHERDALAFVPGEFRRVELSLLVRRDHPRATDIIATFNREIAAMLADGSYAAIF 276
           +  R+LG ++          R+ +   LVR+  P    +   F  E+     + +YAAI 
Sbjct: 182 YLLRQLGLQQQVEELPLVISRQAQYLGLVRK--PGREALAVAFAEELQRFKQEPAYAAIS 239

Query: 277 VRH 279
            R+
Sbjct: 240 NRY 242