Pairwise Alignments

Query, 288 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

Subject, 255 a.a., amino acid ABC transporter substrate-binding protein from Pectobacterium carotovorum WPP14

 Score = 50.4 bits (119), Expect = 4e-11
 Identities = 58/228 (25%), Positives = 94/228 (41%), Gaps = 38/228 (16%)

Query: 69  WPPYTDRSLPGE--GLSVELIRTALGRGGYQVEYIEVPWERALLGLRKGSYDLVNGWPAV 126
           + PYT     G+  G  V++ R    + G + ++IE  W+  + G+    YD V     V
Sbjct: 42  YAPYTYHDKSGQLVGFDVDIGRAVAEKLGVKAQFIEGRWDGLIAGIDAKRYDAVINQVGV 101

Query: 127 -----KRVDYS---LSSRAFLINRMRWVQRRGSGIRYDGLDSLTGYLLVLSRGYTYSDEL 178
                 + D+S   + S+A L+        RG          L G     S    YS + 
Sbjct: 102 TKERQAKYDFSKPYIDSKAVLV-------VRGDNTTIKDFSDLKGKKSAQSLTSNYSKQA 154

Query: 179 DADTRLQKGYAANFV------QAATMVLAGRADLTLEDERTAL-FHFERELGHERDALAF 231
            +       Y A  V      Q+  +VL+GRAD TL D  + L F  ++   + + A   
Sbjct: 155 TS-------YGAEIVPTDGFNQSLDLVLSGRADATLNDNLSFLDFKKQKPDANVKIAATS 207

Query: 232 VPGEFRRVELSLLVRRDHPRATDIIATFNREIAAMLADGSYAAIFVRH 279
             GE      ++LVR+D      ++   N+ +  + ADG+Y  I VR+
Sbjct: 208 KDGE----PSAILVRKDQ---APLVEALNKALDEIKADGTYKTISVRY 248