Pairwise Alignments

Query, 481 a.a., Long-chain acyl-CoA synthetases (AMP-forming) from Pseudomonas stutzeri RCH2

Subject, 555 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Pseudomonas fluorescens GW456-L13

 Score =  107 bits (266), Expect = 1e-27
 Identities = 129/521 (24%), Positives = 199/521 (38%), Gaps = 85/521 (16%)

Query: 27  LSYAELRHEVATRACQLEQLGVQR---VALALDNGLEWALWDLALLRAKLVCVPLPAFFS 83
           L++A++ H+    A  L    + +   +AL   N   W + DLA+  A  V VPL    +
Sbjct: 37  LTWADVGHQARCAAHWLRARELPQGSHIALISKNCAHWIVADLAIWMAGHVSVPLYPNLT 96

Query: 84  AAQQEHVLQHAGIDCLIGGPSALSERCGFQ----------------PGEAGLLLRQLETV 127
           A     VL+H+       G   L +  G                  PG+       L+  
Sbjct: 97  AETVAQVLEHSQAALAFIGK--LDDWPGMSRGVSPDLPTISLPLHPPGDFDFSWDDLQRS 154

Query: 128 TPVPPGT-------LKITYTSGTTGQPKGVCLDAEAQLAVAESLRQASLACDVQQHLC-V 179
           +P+             I YTSGTTG PKGV + +   L  A +   A    +    L   
Sbjct: 155 SPIQDNPKPDADQLATIIYTSGTTGMPKGV-MHSFGTLGFATTRGTALFGLNESDRLLSY 213

Query: 180 LPLATLLENIAGLYAPLLAGARIDLRPLAEIGFSGAAGFELPCFVTTLNENRPHSLILLP 239
           LPL  + E +    A +  G  +                 L  F+T L   RP +L  +P
Sbjct: 214 LPLCHVAERMFVELASIYTGQTVFFAE------------SLDTFLTDLRRARPTALFGVP 261

Query: 240 QLLLALVSAAEQGVP---------LPT----------------SLRFIAVGGGRVAPQLL 274
           ++           +P         LP                 +LR    G   V   LL
Sbjct: 262 RIWTKFQMGVYSKIPAKRLDFLLGLPIIGKRIGHKVLAGLGLDALRIALSGAAPVPQTLL 321

Query: 275 ERAERLGLPVFEGYGLSECASVVCLNTPEARCIGTVGRPLAHVGLRLADDGEVLVK-GPR 333
           +   +LGL V E YG++E      +  P     G +G+P   V +R+A+ GEV+V+ G  
Sbjct: 322 QWYRKLGLDVLEVYGMTESCGYSHIGMPGQNKPGWIGKPCPEVEVRIAETGEVMVRSGAT 381

Query: 334 MLGYLGEPPQAGE------WLATGDLGHFE-DGFLILHGRKKHQFVTAYGRNVNPEWVEA 386
           MLGY  EP +  +      +L TGD G  + +G L L GR K  F T+ G+ V P  +E 
Sbjct: 382 MLGYYKEPEKTADTITEDGFLRTGDKGEEDAEGNLRLTGRLKEIFKTSKGKYVAPAPIEN 441

Query: 387 ELVQQAPIAQAWLHGEALPQNVAVLVPRHPELSDA----------DLQAAIDRVNAGLPD 436
            L   + I Q  + G+ L   + + V       DA           L+  ++ VN  L  
Sbjct: 442 RLAVHSRIEQVCVVGDGLSAPLGLCVLSAVGQQDAGGAARAGLHSSLEKLLEEVNGALDK 501

Query: 437 YARVHHWLRADAPFTAGNGLATANGRLRRNALINRYQSAIE 477
           + ++   +     +   NG  T   +++RN +   Y    E
Sbjct: 502 HEQLRRLVVVKDSWAVENGFLTPTLKIKRNVIEAAYGKRFE 542