Pairwise Alignments

Query, 375 a.a., 16S RNA G1207 methylase RsmC from Pseudomonas stutzeri RCH2

Subject, 332 a.a., Ribosomal RNA small subunit methyltransferase C from Pseudomonas putida KT2440

 Score = 85.1 bits (209), Expect = 3e-21
 Identities = 76/276 (27%), Positives = 119/276 (43%), Gaps = 10/276 (3%)

Query: 103 EMAQGPFDLVLIRVPKTLALLEEQLIRLHGQLSPGAQVIAAAMIKHLPRAAGDLLEQYIG 162
           E  +  FD  ++ +PK+  L    L  L  +L+     +       +  AA  L  Q  G
Sbjct: 62  EAPEAAFDSAVLFLPKSRELAAYLLNALASRLAGRELYLVGEKRGGIEGAAKQL--QAFG 119

Query: 163 AVQASLAVKKARLLSATASEKPA--PQSPYPTRYRL--DQPKLELLNHANLFCREGLDIG 218
             +   + +  +L   T  + P   P      R+ L  +   L++++   +F    LD G
Sbjct: 120 KPRKLDSARHCQLWQVTIDQAPQAKPLESLAERFELALEDGPLQVVSLPGVFSHGRLDRG 179

Query: 219 TRAFLPHLPQALGALRVADLGCGNGVLGIVYALGNPQAELTLVDESYMAVQSARENWQAI 278
           T   L HL    G   + D GCG GVLG       PQ+ +TL+D    AV ++R    A 
Sbjct: 180 TALLLKHLDGLPGG-HMLDFGCGAGVLGATLKRRYPQSRVTLLDVDAFAVAASRLTLAA- 237

Query: 279 LGERPADIRAGDGLAEQAPGSLDLVLCNPPFHQQQVVGDFLAWRMFTQAKAALAKGGELW 338
                 ++ +GDG+ + AP  L L+L NPPFH         +  +  ++   L KGGE+ 
Sbjct: 238 -NGLEGEVISGDGI-DAAPTELSLILSNPPFHTGVHTNYQASENLLKKSAVHLRKGGEMR 295

Query: 339 IVGNRHLGYHLKLKRLFGNAEQVAATPKFVIIKATR 374
           +V N  L Y   ++   GN +       F I +ATR
Sbjct: 296 LVANSFLRYQPLIEGALGNCQVRDEADGFRIYQATR 331