Pairwise Alignments

Query, 261 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 609 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  119 bits (297), Expect = 2e-31
 Identities = 65/161 (40%), Positives = 94/161 (58%), Gaps = 3/161 (1%)

Query: 96  LREASTLDSLTGIANRRLLTERLREESERAKRYARPLAVVMLDIDRFKLINDEHGHEVGD 155
           L + +  D+LTG  +RR + E  ++E  R  RY  P++++ +D+D FK +ND HGH  GD
Sbjct: 295 LEQLAQHDNLTGTWSRRRIEESAQQEMLRKTRYGHPVSLIFIDLDHFKKVNDGHGHAAGD 354

Query: 156 RVLIEVVRVMEAEIREQDLCGRWGGEEFLILMPECTAPTAGAVMARMGESISALGVRVND 215
            VL     + +  +R  DL GRWGGEEF+I+ P      A  +  R+ ++I A   +   
Sbjct: 355 EVLKTFCDIAQKCMRSTDLLGRWGGEEFVIVTPNSGLMIAILLAERIRKAIMAYEFQ--- 411

Query: 216 SLLGVTASMGIAELRAEETYSSTINRADFALLRAKRSGRNR 256
            +  VTAS G+AE R EET+ S + R+D AL  AK  GRNR
Sbjct: 412 GIGHVTASFGVAEYREEETWESWLCRSDAALYAAKEGGRNR 452