Pairwise Alignments

Query, 736 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 631 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  322 bits (826), Expect = 3e-92
 Identities = 187/438 (42%), Positives = 264/438 (60%), Gaps = 6/438 (1%)

Query: 284 TDISARKAAEECLRHAARHDALTGLANRLHLDELLKEVQQRPYG--RAAALLFIDLDRFK 341
           +DISA K +E+ L + A HD LTGL NRL   + L++         R  ALL +DLD F+
Sbjct: 194 SDISAIKHSEQELAYLAHHDPLTGLPNRLLFTDRLEQALAAAQANKRGCALLLLDLDHFQ 253

Query: 342 LINDSLGHGAGDQVLVEVAQRLLHCLRPGDHLARFGGDEFVALLGDLACEADAERVAQRM 401
            IND LGH  GDQ+L  V +RL   L  G  LAR GGDEF  L+ +      A ++AQ +
Sbjct: 254 SINDGLGHTIGDQLLKLVGERLGEVLGNGVTLARLGGDEFGVLVENCQQVGQAGKLAQCI 313

Query: 402 LVALREPLQLGERTLSVSASIGIAPLQRDGQ-ALNVLQAADLALYRAKSAGKDQFALFCD 460
           +  +REP Q     L +SAS+GI+    D   A  +L+ AD ALY+AKS G+  +AL+ +
Sbjct: 314 IERMREPFQFDGNRLFISASVGISLYPSDALGAEQLLRNADSALYKAKSNGRACYALYTE 373

Query: 461 GLHSKAARQLELESALAQALTRREFTLHYQPICRVEQGQPYLLGVEALLRWRFEDKP-VA 519
            L + A  ++E  + L +AL + E  +++QP+  +  G+   +GVE L+RW+   +  V 
Sbjct: 374 ELTAHAQHRVETAAELRRALEQDELRVYFQPVHDLASGRQ--VGVETLVRWQHPRRGLVP 431

Query: 520 PMEFIPVLEESREIVRVGEWVLREACRQVRRWQQAGQTQLYCAVNLSIRQLQQVDFAELL 579
           P EFIP+ E +  I  +  WVLR+ACRQ+ +WQ  G+   +  VN+S R   Q +    +
Sbjct: 432 PGEFIPIAERTGLIAEIDTWVLRQACRQMVQWQAQGRQLAFVGVNISSRLFGQHELYRQV 491

Query: 580 ARVLRETGLPPQSLLLEITETLLMHDSEMMLNCLHEVAALGVRLALDDFGTGYCSLGYLK 639
           A VL +TGL P  L LE+TE+ +M D E+ L  LH +  LGV LA+DDFGTGY SL  LK
Sbjct: 492 AEVLHDTGLAPALLELEVTESAVMEDPEVALEQLHRLRELGVTLAIDDFGTGYSSLLRLK 551

Query: 640 RYPLHVLKVDRSFIAAAPDDADSVAISGAIIGLGQSLGLAVVAEGVERPEQIEFLVAQGC 699
           R P+  LK+D+ F+A  P D D +AI   II L +S+G+ V AEG+E+ EQ  FL+ + C
Sbjct: 552 RLPVQKLKIDQGFVAGLPVDEDDIAIVRVIIALARSMGMQVHAEGIEQAEQASFLLQEEC 611

Query: 700 RAVQGYWFSPPRPAPELQ 717
           +  QGYWF  P PA +L+
Sbjct: 612 QLGQGYWFGRPVPAEDLR 629