Pairwise Alignments

Query, 206 a.a., Site-specific recombinase XerC from Pseudomonas stutzeri RCH2

Subject, 208 a.a., Site-specific recombinase, phage integrase family from Pseudomonas putida KT2440

 Score =  366 bits (939), Expect = e-106
 Identities = 187/208 (89%), Positives = 195/208 (93%), Gaps = 2/208 (0%)

Query: 1   MNTIATYSHQPWNKGKLVGQKAPLRLRDIWAIRVRLQIAERSRDLALFDLAIDSKL--RA 58
           MN I T SHQP NKGKLVGQKAPLRL+DIWAIRVRLQIAE +RDLALFDLAIDSKL  RA
Sbjct: 1   MNAITTSSHQPLNKGKLVGQKAPLRLKDIWAIRVRLQIAEETRDLALFDLAIDSKLKLRA 60

Query: 59  CDLTKLRVRDVAHGENLSSRAMVMQQKTQRPVQFEITEQTRSALAAWIHQAQLRSEDCLF 118
           CDLTKLRVRDVAHGE++SSRA+VMQQKTQRPVQFEITEQTR AL AWIHQAQL SEDCLF
Sbjct: 61  CDLTKLRVRDVAHGEHVSSRAIVMQQKTQRPVQFEITEQTRLALQAWIHQAQLHSEDCLF 120

Query: 119 PSRLHTSDHLSTRQYARIVKGWVKAIGLDPAMYGTHTMRRTKASLIYRRTKNLRAVQLLL 178
           PSRLH S HLSTRQYAR+VK W+K+IGLDPAMYGTHTMRRTKASLIYRRTKNLRAVQLLL
Sbjct: 121 PSRLHASVHLSTRQYARMVKAWIKSIGLDPAMYGTHTMRRTKASLIYRRTKNLRAVQLLL 180

Query: 179 GHTKLESTVRYLGIEVDDALEMAEQTEV 206
           GHTKLESTVRYLGIEVDDALEMAEQTEV
Sbjct: 181 GHTKLESTVRYLGIEVDDALEMAEQTEV 208