Pairwise Alignments

Query, 322 a.a., Geranylgeranyl pyrophosphate synthase from Pseudomonas stutzeri RCH2

Subject, 309 a.a., Octaprenyl diphosphate synthase (EC 2.5.1.90) from Variovorax sp. SCN45

 Score =  311 bits (798), Expect = 1e-89
 Identities = 164/297 (55%), Positives = 210/297 (70%)

Query: 17  VDGIIRKQLTSRVPLVEKIGDYITSAGGKRLRPLLVLLSGSALGHQGDQLRLLAAIIEFL 76
           VD +I ++L + VPLV ++  YI SAGGKRLRP L+LL   ALG+ G+Q   LAA++EF+
Sbjct: 4   VDRVISRRLDTGVPLVSQVSKYIISAGGKRLRPALLLLMSGALGYTGEQRFNLAAVVEFI 63

Query: 77  HTSTLLHDDVVDMSGMRRGRSTANALWGNAPSVLVGDFLYARSFEMMVELDSMPVMRIIS 136
           HT+TLLHDDVVD S +RRGR+TAN  +GN  SVLVGDFLY+R+F+MM++ ++M VM+I++
Sbjct: 64  HTATLLHDDVVDESTLRRGRATANESFGNPASVLVGDFLYSRAFQMMLDANNMRVMQILA 123

Query: 137 QATRVIAEGEVLQLSKVRDASTTEEIYMEVIRGKTAMLFEASTHSAATLAGASEEQREAL 196
           +AT VIAEGEVLQL  + DAS  E  Y+ VIR KTA LFEAST  AA LAG + E  EA 
Sbjct: 124 EATNVIAEGEVLQLMNMHDASLDEAAYLRVIRSKTAKLFEASTRLAAVLAGTTPEVEEAC 183

Query: 197 RTFGDHLGIAFQLVDDLLDYQGDAETLGKNVGDDLAEGKPTLPLIYTMREGTTEQAALVR 256
            T+G  LG AFQ++DD+LDY GDA   GKNVGDDL EGK TLPLI+ M+ GT  Q+ LVR
Sbjct: 184 ATYGQALGTAFQVIDDVLDYAGDANETGKNVGDDLREGKTTLPLIFAMQRGTPAQSQLVR 243

Query: 257 KAIQKGGLEDLESIRTAVEAAGALDYTAKLARDYAERAIACLEVIPANQYRDALVEL 313
            AI+ G    L  +   V   GALD + + A   A+RAI  L   P+N +   L++L
Sbjct: 244 AAIEAGDTAQLGKVVEIVRETGALDASREAAAAEAQRAIHALNGFPSNLHASGLLQL 300