Pairwise Alignments

Query, 385 a.a., Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain from Pseudomonas stutzeri RCH2

Subject, 390 a.a., trypsin-like peptidase domain-containing protein from Rhodanobacter sp000427505 FW510-R12

 Score =  282 bits (721), Expect = 1e-80
 Identities = 172/382 (45%), Positives = 231/382 (60%), Gaps = 11/382 (2%)

Query: 5   LRFLGWPLLVGLLVALLIIQRYPQLVGIKERDIGLRQAPLVAT--TPQQGPYSYANAVAG 62
           L F+    ++GL +A ++   +P   G      GLR A   AT  +P +GP SYA+AVA 
Sbjct: 8   LLFIARFAILGLAMAFVVGLFWPGSGGRLRERFGLRPATPSATPASPGRGPVSYADAVAA 67

Query: 63  AAPAVANLYTTKVIEKTEQQAPLSKDPLFQRFFNDNLPRQRRMESSLGSAVIMSPEG--Y 120
           AAP+V N+Y  +++  TEQ   +  +P+ Q+ F       +  E +LGS VI+S +G  Y
Sbjct: 68  AAPSVVNIYANRIV--TEQAVRMYDNPVLQQLFGGQPTTFQHREQTLGSGVIVSAQGQGY 125

Query: 121 LLTNNHVTANAEQIVVALKDGRETLARVIGSDPETDLAVLKIDLADLPAITVGHSDRIRV 180
           +LTNNHV A A  I V L DGR   A ++G+D E+DLAVLKID ++LP I +     +R 
Sbjct: 126 VLTNNHVIARAADIQVLLYDGRIAKASLVGADEESDLAVLKIDASNLPVIHIA-GQPLRP 184

Query: 181 GDVTLAIGNPFGVGQTVTMGIISATGRNQLGLNTYEDFIQTDAAINRGNSGGALVDAEGN 240
           GDV LAIGNP G+ QTVTMGI+SA GR QL  ++ EDFIQTDAAIN GNSGGALV+AEG 
Sbjct: 185 GDVVLAIGNPLGLNQTVTMGIVSAIGR-QLNSSSAEDFIQTDAAINLGNSGGALVNAEGE 243

Query: 241 LIGINTAIISESGGSQGIGFAIPVKLALEVMKSIIDHGQVIRGWLGVEVQSLTQELAESF 300
           L+GINT +I ++ G++GIGFAIPV  A +V+  II  G V+RGWLG +   +   +A + 
Sbjct: 244 LVGINTLLIGKAAGAEGIGFAIPVTTAKKVLDQIIATGHVVRGWLGADYAFV--PVAANG 301

Query: 301 GQEGRP-GIVVAGVYRDGPAARAGLQPGDLILSIDGVQSADGRSSMNQVARARPGDKIDI 359
           G  G   G +V   Y   PAA AG++P D++L I      D      + A  +PG  + I
Sbjct: 302 GLPGAARGALVTMAYPGSPAALAGIRPRDILLRIGSDDILDPTDLRRREAALKPGSTVTI 361

Query: 360 DILRNGKPLTLTAEVGMRAPVS 381
             LRNG P  L      R  +S
Sbjct: 362 SGLRNGSPFHLEVTPVQRPALS 383