Pairwise Alignments

Query, 458 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase from Pseudomonas stutzeri RCH2

Subject, 456 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Pseudomonas simiae WCS417

 Score =  599 bits (1544), Expect = e-176
 Identities = 315/459 (68%), Positives = 357/459 (77%), Gaps = 4/459 (0%)

Query: 1   MLDAMRLSELQQPLSGRLVGADVSFAAVSTDSRAIEPGQLFIALTGPRFDGHAYLADVAA 60
           ML AM+ SEL Q LS R++ +D SF  VS DSR I+PGQLF+ALTGPRFDGH YL +VAA
Sbjct: 1   MLKAMKFSELTQALSARVLSSDCSFDGVSIDSRNIKPGQLFVALTGPRFDGHDYLNEVAA 60

Query: 61  KGAVAALVEREIETSTLPQLVVADTRLALGLLGASNRNAFNGPVAAITGSSGKTSVKEML 120
           KGAV ALV+R +  STLPQL+VADTRLALG LGA NR AF  PVAAITGSSGKT+VKE+L
Sbjct: 61  KGAVGALVQRAVADSTLPQLLVADTRLALGQLGALNRAAFTNPVAAITGSSGKTTVKELL 120

Query: 121 ASILRSAYGQNAVLATRGNLNNDLGAPLTLLELCDEHRAAVIELGASRPGDIAYTVKLVR 180
           A +LR+   +  V ATRGNLNND GAPLTLLEL  EH AAVIELGASR G+IAYTV L +
Sbjct: 121 AGVLRT---RGPVHATRGNLNNDFGAPLTLLELAPEHTAAVIELGASRVGEIAYTVALTK 177

Query: 181 PDVSLITNAGSAHVGEFGGPHKIVEAKGEILDGLSESGIAVLNRDDKAYPIWAERVAGKR 240
           P V +I NAG+AHVGEFGGP KIVEAKGEIL+GL  SGIAVLN DDKA+  W  R AG++
Sbjct: 178 PHVVVINNAGTAHVGEFGGPEKIVEAKGEILEGLDASGIAVLNLDDKAFETWRVRAAGRK 237

Query: 241 IVSFGLDNPLADFSAGSIAYDQRGCPSFVLTGPLGNLRIQLNLLGRHNVANALAAAAAAY 300
           +++F + N  ADF A +I  D RGCPSF L  P GN  +QLNLLG HNVANALAAAAAAY
Sbjct: 238 VLTFAVLNAAADFHASNITVDARGCPSFTLHTPQGNEHVQLNLLGNHNVANALAAAAAAY 297

Query: 301 ALGVDADAVVAGLQQLQPVKGRAVAQMLANGVRLIDDSYNANPASICAAIDVLASFAGRT 360
           ALGV    +  GL  +QPVKGR VAQ+  NG+R+IDD+YNAN +SICAAID+L SF GR 
Sbjct: 298 ALGVSLFGIATGLGAVQPVKGRTVAQLATNGMRVIDDTYNANQSSICAAIDLLKSFEGRK 357

Query: 361 ILVLGDMGELGEWAEQGHREVGAYAVGKVDTLYAVGPLMAHAVQAFGPGARHFADQASLI 420
           +LVLGD+ ELG+WAEQ HREVGAYA GKVD LYAVGP MAHAV  FGPGARHF  QA LI
Sbjct: 358 VLVLGDIAELGDWAEQSHREVGAYAAGKVDALYAVGPNMAHAVSVFGPGARHFVTQAELI 417

Query: 421 DSL-RAEQGSGTTILIKGSRSAAMDKVVDALAGPSMEKH 458
            +L  AE    TTILIKGSRSA M+ VV AL G S EKH
Sbjct: 418 QALTAAEHDKHTTILIKGSRSAVMENVVAALCGSSTEKH 456