Pairwise Alignments

Query, 485 a.a., UDP-N-acetylmuramate--alanine ligase from Pseudomonas stutzeri RCH2

Subject, 449 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Pseudomonas putida KT2440

 Score =  161 bits (407), Expect = 5e-44
 Identities = 113/369 (30%), Positives = 186/369 (50%), Gaps = 18/369 (4%)

Query: 21  IHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKE-SASTDRLQSFGAQIFIGHQAGNVAGA- 78
           IH +GI G  M  +A +   LG+ V+GSD       + +L++ G ++  G+    +  A 
Sbjct: 3   IHILGICGTFMGSLAVLAKELGHRVTGSDANVYPPMSTQLEAQGIELTQGYDPAQLDPAP 62

Query: 79  DVLVVSSAVNSANPEVALALEQRIPVVPRAEMLAE-LMRYRHGIAVAGTHGKTTTTSLLA 137
           D++V+ +A++  NP V   L + +P V   + LA+ +++ R  +AVAGTHGKTTT+S+LA
Sbjct: 63  DLVVIGNAMSRGNPAVEYVLNKGLPYVSGPQWLADHVLQGRWVLAVAGTHGKTTTSSMLA 122

Query: 138 SVFAAGGLDPTFVIGGRLTAAGTNAQLGSSRYLIAEADESDAS-------FLHLQPMVAV 190
            V    G+ P F+IGG       +A+LG + + + EADE D++       F+H  P  A+
Sbjct: 123 WVLEHAGMSPGFLIGGVPQNFSASARLGDTPFFVVEADEYDSAFFDKRSKFVHYHPRTAI 182

Query: 191 VTNIDADHMSTYGGDFGKLKKTFVEFLHNLPFYGLAVLCVDDPVVREIIPQIGRPTTTYG 250
           + N++ DH   +  D   +++ F   +  +P  GL +    +  +  +I  +G  T    
Sbjct: 183 LNNLEFDHADIF-PDLASIERQFHHLVRTIPSEGLVIHPTTEQALERVI-GMGCWTPVQT 240

Query: 251 FSEDADVRAINVRQEGMRTYFTVLRDGCEPLDVSVHMPGNHNVLNALATIAIATDEGIDD 310
             E    +A  +  +G R  F VL +G     V   + G HNV NALAT+A A   G+  
Sbjct: 241 TGEGGQWQARLLSPDGSR--FEVLFEGEVQGVVDWALTGQHNVANALATLAAARHVGVVP 298

Query: 311 EAIIQGLAEFAGVGRRFQVYGDLPVENGSVMLVDDYGHHPREVAAVIKAVRGGWPERRLV 370
              I GL+ F  V RR +   ++      V + DD+ HHP  +A  +  +R    E  ++
Sbjct: 299 AMGIDGLSAFKSVKRRMEKVAEVQ----GVTIYDDFAHHPTAIATTLDGLRKRVGEAPVI 354

Query: 371 MVYQPHRYS 379
            V +P   S
Sbjct: 355 AVIEPRSNS 363