Pairwise Alignments

Query, 709 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 724 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  308 bits (790), Expect = 5e-88
 Identities = 211/739 (28%), Positives = 362/739 (48%), Gaps = 55/739 (7%)

Query: 3   RSIQTAFAALAGACTLAIIAALLLYAMVSGMRSQALVEERTRTLIDGMVEQRVTALAQSQ 62
           +SIQ   A   G C LA    L+ Y++     +Q LV  R          Q +  L    
Sbjct: 5   KSIQQRIAITGGLCLLATAGILIGYSVYLASTTQQLVSGRVSQQAQEDALQTLQHLGGKY 64

Query: 63  VSRIQAQLQAPLQIATGLARVHTLTGLSDDEGMPMANLTREELINLARQTLIENPSLTST 122
              I+++    L+ A G+A    + G S         + R+E+ ++    L   P    T
Sbjct: 65  AGEIRSEFTEALEAARGMATTFAV-GKSGSTNSGGLQIGRDEVNSILLNVLKSQPDFNGT 123

Query: 123 YIAWEPNGVDANDVMYRGDVPGM--LEGRFASWIYRDASGKLLTERLTDIEDTTLLETGV 180
           Y  WEP+ +D  D ++     G     GRF  +  R A GK+  + L + +       GV
Sbjct: 124 YSCWEPDAIDGQDFLFTDGQNGNNGQTGRFTPYWTRGADGKIAVQPLVEYDTMDKHPNGV 183

Query: 181 RAGEYYLCPREQLKPCVGDPAPYEMNGQTQLLSSFNAPIIIDGKFHGIVGADIGVDFMQQ 240
             G +Y+ PRE LK  V  P PY + G+   L++ + PII+DG+F G+ G D  +DF+QQ
Sbjct: 184 LKGGWYIGPRETLKESVLGPLPYIVQGKQVWLATLSVPIIVDGRFTGVAGTDYNLDFVQQ 243

Query: 241 LLSSANSQLYGGAGQIALISNNGRLAAYSRDRNLLGKPAAQLLDADEQALVKQLPAGQTH 300
           +    +++L+ G G++A+IS+ G + A SR  NL+G+   ++L    Q  +  +  G+  
Sbjct: 244 ISQEVSAKLFDGQGEVAIISDQGLIVAESRFPNLIGQHFQKVLPDGWQTALTSVQKGEEL 303

Query: 301 YRIDHARGRVALFLPFSFPGTDARWVLMLELPTAEVMKELDQLMVALGEESRSNLAAMLV 360
            R+D   G V +F P     T   W +ML++    V+ +  +L   +  +S  ++   + 
Sbjct: 304 ARLDD-NGMVVVFAPIELGRTGKPWSMMLKIDKEIVLAKATELKAEMDAQSARSMLQQIG 362

Query: 361 IGMLIAFAGLLAIWLISRRITRPLRDMVVMLDNISQGEGDLTQRLNIDSRNELGQIAAGF 420
            G+LI+   ++A+W+ SR +  P+R    +   I   +GD +QR+   S +E+GQ++A  
Sbjct: 363 AGVLISLLAVIALWISSRALALPIRKAAQLAGAIQ--KGDFSQRMAHQSADEVGQLSAS- 419

Query: 421 NAFLARLQGMISEVVSSVQKVSD----------ASEHTADIAIR----TDKGVQTQLAE- 465
              L R+   + E V   +++S           + +    +A+R       G+ +Q+ + 
Sbjct: 420 ---LDRMADSLQEQVHVAERISQGDLAVEVRLASEQDQLGLALRRMVDNLNGLVSQVQQS 476

Query: 466 IELVATAVHEMTATAQDVARNATQAAEAANNADRAANQGRHIVQDTGATIAELASEIGRA 525
            EL+      +T  +QD++  AT++A A        NQ    ++ T    +E A+ + R 
Sbjct: 477 SELINDKAGRVTTLSQDLSNGATESASAVTEISATVNQMAGQIRQTSEYASE-ANALSRN 535

Query: 526 VD---------------VVQTLARDSENIDAILVTIRSIAEQTNLLALNAAIEAARAGEQ 570
            +                +Q + +   +I  I+  I  IA QTNLLALNAAIEAARAGE 
Sbjct: 536 SEHSARSGNELMVSLKAAMQEINQSGLDITNIIRAIEEIATQTNLLALNAAIEAARAGEH 595

Query: 571 GRGFAVVADEVRNLAQKTQQATGEIQQMIQQLQGGTRDVVQVMEQSQNRTRRSVEQADAA 630
           GRGFAVVADEVR LA ++ +A     ++IQ              +S  RT + +E  D  
Sbjct: 596 GRGFAVVADEVRQLAARSAEAAQRSTRLIQ--------------ESNARTIKGMEITDDT 641

Query: 631 AEALQAITQAVSLINDMNNQIASAAEEQSAVAEDINRNVTNIGQVAQQVAAGADEASQAS 690
           A AL+AI Q  + ++ + ++IASA+ +Q++  E +++ +  I +V    +  +++++QA+
Sbjct: 642 ARALEAIVQGAAQVSQLVDEIASASSQQASGIEQVSQAIGQIDEVVHHNSTNSEQSTQAA 701

Query: 691 AGLTRLAEQQRRLINQFRV 709
             LT+ A+Q    + +F+V
Sbjct: 702 QELTQQAQQMIVQVGRFKV 720