Pairwise Alignments

Query, 709 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  828 bits (2138), Expect = 0.0
 Identities = 432/710 (60%), Positives = 544/710 (76%), Gaps = 2/710 (0%)

Query: 2   FRSIQTAFAALAGACTLAIIAALLLYAMVSGMRSQALVEERTRTLIDGMVEQRVTALAQS 61
           F+SIQ + AALAGA  L+++A L+LYA+ +G R+Q +V++RT+   + ++EQR+TALAQ+
Sbjct: 3   FKSIQFSVAALAGAIVLSVVAVLVLYALFAGARTQEMVQDRTQVQFEQIIEQRLTALAQT 62

Query: 62  QVSRIQAQLQAPLQIATGLARVHTLTGLSDDEGMPMANLTREELINLARQTLIENPSLTS 121
           Q + IQ +L+APL  A  LA  + L G+ D +G P   ++RE+LINL  +T++ NP +  
Sbjct: 63  QATLIQRELEAPLVTAKSLATANALLGMKDAKGEPALQVSREQLINLLHETVVRNPKILG 122

Query: 122 TYIAWEPNGVDANDVMY-RGDVPGML-EGRFASWIYRDASGKLLTERLTDIEDTTLLETG 179
            YI WEPN +D ND  Y    + GM  +GRF  W YR+A G L  ++L D+ D  +L TG
Sbjct: 123 AYIGWEPNAIDHNDAAYVNSPIVGMAADGRFLPWWYRNADGSLGLDKLADVNDQNILSTG 182

Query: 180 VRAGEYYLCPREQLKPCVGDPAPYEMNGQTQLLSSFNAPIIIDGKFHGIVGADIGVDFMQ 239
           VRA EYYLC +E  K C  DPAPY++     +L+SF  PI+IDG F GIVGAD+ V+F+Q
Sbjct: 183 VRASEYYLCSKENKKACAIDPAPYKVGNAMVMLASFIEPIMIDGAFQGIVGADLSVNFIQ 242

Query: 240 QLLSSANSQLYGGAGQIALISNNGRLAAYSRDRNLLGKPAAQLLDADEQALVKQLPAGQT 299
            +L+SA+ +LY GAG++ALIS+NGRL AY++D + LG+ A+ LLD++E   + QL AG+ 
Sbjct: 243 DMLTSADQKLYNGAGEMALISSNGRLVAYTKDASKLGEKASDLLDSNELTNLNQLKAGEV 302

Query: 300 HYRIDHARGRVALFLPFSFPGTDARWVLMLELPTAEVMKELDQLMVALGEESRSNLAAML 359
            Y ID   G + LFLPF+    DARW LML+LP + VM +  +L   L  + ++++  M 
Sbjct: 303 RYDIDKEHGHIELFLPFTIGQADARWTLMLQLPLSAVMADSQKLQSDLEAQRKTDIFGMT 362

Query: 360 VIGMLIAFAGLLAIWLISRRITRPLRDMVVMLDNISQGEGDLTQRLNIDSRNELGQIAAG 419
           + G+LIA  GLL IWL+   I RPL+ MV ML++I+QGEGDLT+RL  D  +ELG IA G
Sbjct: 363 IAGLLIAGIGLLVIWLVGHGIARPLKQMVAMLNDIAQGEGDLTRRLTSDRADELGAIANG 422

Query: 420 FNAFLARLQGMISEVVSSVQKVSDASEHTADIAIRTDKGVQTQLAEIELVATAVHEMTAT 479
           FN FL +LQGMI++VVSSVQKVSD+SEHTADIAIRT++GV  Q+ EI+ VATAVHEMTAT
Sbjct: 423 FNTFLIKLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVHEMTAT 482

Query: 480 AQDVARNATQAAEAANNADRAANQGRHIVQDTGATIAELASEIGRAVDVVQTLARDSENI 539
           AQDVARNATQAA+AA++AD+AA+QG  IV+DT  +I  LA EIG+AV VVQTLA+DSENI
Sbjct: 483 AQDVARNATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAKDSENI 542

Query: 540 DAILVTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQATGEIQQMI 599
           +AIL  IR IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQ+AT EIQ MI
Sbjct: 543 NAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTMI 602

Query: 600 QQLQGGTRDVVQVMEQSQNRTRRSVEQADAAAEALQAITQAVSLINDMNNQIASAAEEQS 659
           QQLQ GTRDVV+VME SQ+RT  SV+ A  AAEAL+ ITQAVS+INDMN QIASAAEEQS
Sbjct: 603 QQLQQGTRDVVRVMEDSQSRTDESVQHAAKAAEALETITQAVSVINDMNTQIASAAEEQS 662

Query: 660 AVAEDINRNVTNIGQVAQQVAAGADEASQASAGLTRLAEQQRRLINQFRV 709
           AVAEDINRNV NIGQVA +VA GADE+S ASA LT+LAEQQRRLINQF+V
Sbjct: 663 AVAEDINRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQFKV 712