Pairwise Alignments

Query, 709 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 626 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  288 bits (738), Expect = 4e-82
 Identities = 185/517 (35%), Positives = 297/517 (57%), Gaps = 26/517 (5%)

Query: 194 KPCVGDPAPYEMNGQTQLLSSFNAPIIIDGKFHGIVGADIGVDFMQQLLSSANSQLYGGA 253
           KP +  P    + GQ   ++    P+  +G+  G+VG D+    +Q L+   NS  +GG 
Sbjct: 135 KPMLTPPYMAAVGGQIVTIAM---PVKKNGELLGVVGGDLS---LQTLVKIINSVDFGGI 188

Query: 254 GQIALISNNGRLAAYSRDRNLLGKPAAQLLDADEQALVKQLPAGQTHYRIDHARGRVALF 313
           G   L+S++G++   S +++ + K    +    +  + K      +   + + + R+  F
Sbjct: 189 GHAFLVSSDGQVIV-SPEQDQVMKNLKDIYPGTQVRIEKV-----SQDVVLNGQDRILSF 242

Query: 314 LPFS-FPGTDARWVLMLELPTAEVMKELDQLMVALGEESRSNLAAMLVIGMLIAFAGLLA 372
            P S  PG D  W + L +       + D+    LG+   S L AML+   ++A A LL+
Sbjct: 243 TPISGLPGAD--WYIGLSI-------DKDKAYAPLGKFRTSALIAMLIA--VVAIAVLLS 291

Query: 373 IWLISRRITRPLRDMVVMLDNISQGEGDLTQRLNIDSRNELGQIAAGFNAFLARLQGMIS 432
             L+ + + RPL  M V + +I+QGEGDLT+RL + S++E G++ + FN F+ R+   IS
Sbjct: 292 --LLIQVLLRPLTTMGVAMQDIAQGEGDLTRRLVVTSKDEFGEVGSAFNQFVERIHASIS 349

Query: 433 EVVSSVQKVSDASEHTADIAIRTDKGVQTQLAEIELVATAVHEMTATAQDVARNATQAAE 492
           EV S+ ++V D S+     +  +  G   Q A    VA A++E+ A  Q++ARNA  A++
Sbjct: 350 EVSSATRQVHDLSQRVMASSNASIIGSDEQSARTNSVAAAINELGAATQEIARNAADASQ 409

Query: 493 AANNADRAANQGRHIVQDTGATIAELASEIGRAVDVVQTLARDSENIDAILVTIRSIAEQ 552
            A+ A   A+ GR +V+ T   ++EL+ +I  +   ++TL   ++NI  IL  I+ I++Q
Sbjct: 410 HASGASEQADDGRKVVEQTILAMSELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQ 469

Query: 553 TNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQATGEIQQMIQQLQGGTRDVVQV 612
           TNLLALNAAIEAARAGE GRGFAVVADEVRNLA +TQ++  EI +MI  LQ G+R+ V  
Sbjct: 470 TNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSREAVTT 529

Query: 613 MEQSQNRTRRSVEQADAAAEALQAITQAVSLINDMNNQIASAAEEQSAVAEDINRNVTNI 672
           M  SQ  +  SVE A+ A E L ++TQ +  I+ MN  +A+A EEQ+AV E +N ++  I
Sbjct: 530 MNASQTSSEESVEVANQAGERLVSVTQRIVEIDGMNQSVAAATEEQTAVVETLNVDINQI 589

Query: 673 GQVAQQVAAGADEASQASAGLTRLAEQQRRLINQFRV 709
             + QQ  A  +E  +    L++ A + ++L++ F++
Sbjct: 590 NLLNQQGVANLNETLKDCDALSQQANRLKQLVDSFKI 626