Pairwise Alignments

Query, 365 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Pseudomonas stutzeri RCH2

Subject, 367 a.a., Inner membrane amino-acid ABC transporter permease protein YhdY from Escherichia coli ECOR38

 Score =  497 bits (1280), Expect = e-145
 Identities = 229/355 (64%), Positives = 291/355 (81%)

Query: 8   PDLPPPTISIGALGWLRANLFSSWINTLLTLVGLYLLWLIVPPVLEWAIFKADWTGETRA 67
           P  P    S  A+ W+R NLFSSW N+LLT+  ++L+W ++PP+L WA  +A+W G TRA
Sbjct: 9   PPRPASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWLMWELIPPLLNWAFLQANWVGSTRA 68

Query: 68  DCSREGACWVFIQTRFGQFMYGFYPTELRWRVDAAAWLAIIGAAPLFLRQMPHKLRYGIG 127
           DC++ GACWVFI  RFGQFMYG YP + RWR++ A  + ++  AP+F + +PH+ RY   
Sbjct: 69  DCTKAGACWVFIHERFGQFMYGLYPHDQRWRINLALLIGLVSIAPMFWKILPHRGRYIAV 128

Query: 128 YLLVYPLLAYWLLHGGFLGLQTVPTSQWGGLMLTVVIAAVGIAGALPLGILLALGRRSDM 187
           + ++YPL+ +WL++GGFLGL+ V T QWGGL LT++IA+VGIAGALP GILLALGRRS M
Sbjct: 129 WAVIYPLIVWWLMYGGFLGLERVETRQWGGLTLTLIIASVGIAGALPWGILLALGRRSHM 188

Query: 188 PAIRVLCVTFIEFWRGVPLITVLFMSSVMLPLFLPEGMNLDKLLRAMLMVVFFEAAYIAE 247
           P +R+L V FIEFWRGVPLITVLFMSSVMLPLF+ EG ++DKL+RA++ V+ F++AY+AE
Sbjct: 189 PIVRILSVIFIEFWRGVPLITVLFMSSVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAE 248

Query: 248 VVRGGLQAIPKGQYEAAAAMGLGYWRSTLLVILPQALKLVIPGIVNTFIALFKDTSLVII 307
           VVRGGLQA+PKGQYEAA ++ LGYW++  LVILPQALKLVIPG+VNT IALFKDTSLVII
Sbjct: 249 VVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVII 308

Query: 308 IGLFDFLNSIKRATADPAWLGMSTEGYVFAALVYWMFCFGMSRYSMRLERKLDTG 362
           IGLFD  +S+++AT DPAWLGMSTEGYVFAAL+YW+FCF MSRYS  LE++ +TG
Sbjct: 309 IGLFDLFSSVQQATVDPAWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTG 363