Pairwise Alignments

Query, 180 a.a., Site-specific recombinases, DNA invertase Pin homologs from Pseudomonas stutzeri RCH2

Subject, 210 a.a., resolvase from Agrobacterium fabrum C58

 Score = 53.1 bits (126), Expect = 3e-12
 Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 22/193 (11%)

Query: 6   YVRVSTVDQNTER---QLDGLTLDKVFE------DKCSGKDAHRPALQALIEYVREGDTV 56
           Y+R ST +Q+  R   QL+    D+ F       +  SG    RP L  L+      D +
Sbjct: 6   YLRASTKEQDAGRAKTQLESFAKDRGFSIAAFYVENESGASLKRPELFRLLSDCSPNDVL 65

Query: 57  VVHDISRMAR----NLEDLLSLVKAFNKRGVAVRFNKEGLSFTGEANP--------MQEL 104
           +   + R++R    + E L S + A   R VA+      +      +P        +  +
Sbjct: 66  LTEQVDRLSRLNEADWEALKSEIDARQVRVVALDLPTSHMMLAAAEDPFTGRMFKAVNAM 125

Query: 105 MLSMLGAVYQFERSMMLERQREGIQQAKQAGKYRGGRPRVDAE-AIKAALDSGLSIRKAA 163
           ML ML A+ + +      RQ +G+++AK +G+Y+G     D   A+   L S +S     
Sbjct: 126 MLDMLAAIARKDYEDRRRRQAQGVEKAKSSGRYKGRPEDTDRNAALIRMLKSKMSWNDIV 185

Query: 164 EALGVGISTVQRV 176
            A G   ST+ R+
Sbjct: 186 TATGCSRSTLFRL 198