Pairwise Alignments

Query, 1045 a.a., The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family from Pseudomonas stutzeri RCH2

Subject, 1030 a.a., acriflavine resistance protein B from Pseudomonas simiae WCS417

 Score = 1082 bits (2799), Expect = 0.0
 Identities = 550/1026 (53%), Positives = 737/1026 (71%), Gaps = 5/1026 (0%)

Query: 1    MSRFFIDRPIFAWVIALVIMLAGGLSILKLPVNQYPSIAAPAVGISVSYPGASAQTVQDT 60
            M +FFIDRPIFAWV+AL I+LAG L+I +LPV QYP++A P V I   YPGASAQT+ ++
Sbjct: 1    MPQFFIDRPIFAWVVALFILLAGLLAIPQLPVAQYPNVAPPKVEIYAVYPGASAQTLDES 60

Query: 61   VVQVIEQQLNGIDGLRYISSESNSDGSMTITVTFDQGTNPDIAQVQVQNKLQLATPLLPQ 120
            VV +IEQ+LNG D L Y  S+S S GS TIT TF  GTNP++AQV VQN+L+   P LPQ
Sbjct: 61   VVSLIEQELNGADHLLYFESQS-SLGSATITATFQPGTNPEMAQVDVQNRLKAVEPRLPQ 119

Query: 121  EVQQQGIRVTKAVRNFLIVIGLVSTDGSLDQRDLANYIVANMQDPISRTKGVGDFQVFGA 180
             V QQG++V K    FL+++ L S DG LD   L++Y+  N+ + + R  GVG  Q++GA
Sbjct: 120  AVTQQGLQVEKVSAGFLLLVTLTSNDGKLDDVALSDYLARNVMNELKRLDGVGKAQLYGA 179

Query: 181  QYAMRIWLDPAKLNSFSMTPVDVSTAIQAQNVQISSGQLGGLPALPGQQLNATVIGKTRL 240
            + AMR+W+DP KL  F++TP DV+ AI AQN Q+S+G +G LP    Q++ A ++ K +L
Sbjct: 180  ERAMRVWIDPQKLIGFNLTPADVNAAISAQNAQVSAGSIGDLPGTNTQEITAAILVKGQL 239

Query: 241  QTPEQFRNILLKVNSDGSQVRLGDVARVELGGETYAVSAHFNGKPAAGLALKLATGANAL 300
             TP +F +I+LK N DGS VR+GDVARVE+G + Y  S   NGKP+  ++++L+ GANAL
Sbjct: 240  STPAEFADIVLKANPDGSTVRIGDVARVEVGSQEYQFSTRLNGKPSTAVSVQLSPGANAL 299

Query: 301  DTVEGVRKTIEELKPFFPPGVEVVYPYDTTPVISASITGVMHTLLEAFVLVFLVMYLFLQ 360
            +T   VR  ++EL  +FP  VE   PYDT+P +  SIT V++TLLEA  LVF VM+LFLQ
Sbjct: 300  NTATLVRAKMDELSRYFPANVEYKIPYDTSPFVKVSITKVVYTLLEAMALVFAVMFLFLQ 359

Query: 361  NFRATLVPTLAVPVVLLGTFGVLAVFGFSINTLTMFAMILAIGLLVDDAIVVVENVERVM 420
            N R TL+PTL VP+ L+GTF  + + GFSIN LTMF M+LAIG+LVDDAIVVVENVER+M
Sbjct: 360  NVRYTLIPTLVVPIALMGTFATMLLLGFSINVLTMFGMVLAIGILVDDAIVVVENVERIM 419

Query: 421  REEGLSPLEATRKSMGQIQGALIGIGVVLSAVLLPMAFFGGSTGVIYRQFSITIVSAMVL 480
              EGLSP EAT+K+MGQI GA+IGI +VL AV LPMAF  GS GVIY+QFS+++ ++++ 
Sbjct: 420  ATEGLSPKEATKKAMGQITGAIIGITLVLVAVFLPMAFMAGSVGVIYQQFSLSMATSILF 479

Query: 481  SVLMALIFTPALCATLLKPIDKDDHHEKRGFFGWFNRTFERSVNGYERGVKAVLKRKAPF 540
            S  +AL  TPALCATLLKPI K +HH K GFFGWFN  FE+  + YE  V   LKR   +
Sbjct: 480  SAFLALTLTPALCATLLKPIAKGEHHAKGGFFGWFNTRFEQLTDRYEGWVAYALKRSGRY 539

Query: 541  LLLYVLIVGVMVVLFTRIPSAFLPEEDQGVLFAQVMTPSGSTAERTQQSIDAMRSYLLEE 600
            LL+Y++++  +  +F+R+PS+FLP EDQG     +  P G++  RT Q  + + ++  EE
Sbjct: 540  LLIYLVLLVGLGWMFSRLPSSFLPVEDQGYTITDIQLPPGASKNRTVQVAEQIEAHNAEE 599

Query: 601  EGDIVRSVFTVTGFSFAGRGQSSGIAFIGLKPWSERTNKEDSVFALAQRAQQHFASFRDA 660
             G  V     + GFSF+G GQ++ +AF  LK WSER++ +DS  ++A RA   F+  +DA
Sbjct: 600  PG--VGDTTMIMGFSFSGSGQNAALAFTTLKDWSERSS-DDSASSIADRANMAFSELKDA 656

Query: 661  QVFAFAPPAVMELGNATGFNFFLQDRAGVGQQVLQQARDKFMQLASQSPVLTRVRPNTLR 720
              +A  PP V  LG ++GF F LQDR GVG   L  AR + +  A +SP+L  VR + L 
Sbjct: 657  IAYAVLPPPVDGLGTSSGFEFRLQDRGGVGHAALMAARTELLAAAEKSPILANVRESALA 716

Query: 721  DEPQYQVLIDDEKARVLGISLAEINSTLSIAWGGRYVNDFIDRGRVKKVYLQGVADARMN 780
            + PQ Q+ +D ++A  LG+S A++ + LS A G  Y+NDF ++GR+++V +Q   D R  
Sbjct: 717  EAPQVQLEVDRKQANALGVSFADVGNVLSSAIGSAYINDFPNQGRMQRVVVQAEGDQRSQ 776

Query: 781  PEDLAKWYVRNDAGEMVPFSAFASGEWTYGSPKLSRYNGVSAIEMLGEPAPGYSSGDAMA 840
              DL K  VRN+AG+MVP SAF   +WT G  +L+RYNG  AI + GE APG+S+G+AM 
Sbjct: 777  VADLMKINVRNNAGKMVPLSAFVEAKWTQGPTQLTRYNGYPAIAISGEAAPGHSTGEAMD 836

Query: 841  EVERIVAQLPPGVGYSWTGQSYEERLAGSQTLALYALSLLVVFLCLAALYESWSIPFSVM 900
            E++R+V+QLP G+G  WTG S +ERL+G+Q   L  LSLL+VFLCLAALYESWSIP SV+
Sbjct: 837  EIQRLVSQLPAGLGQEWTGLSLQERLSGAQAPLLLGLSLLIVFLCLAALYESWSIPTSVL 896

Query: 901  LVVPLGIVGALAFTMLRGLSNEVFFQVGLVTTIGLSARNAILIVEFAKALHEQGMSYADA 960
            LVVPLG++GA+    LRG+ N+VFF+VGL+T IGLSA+NAILI+EFAK L++QG     A
Sbjct: 897  LVVPLGVLGAVIAVGLRGMPNDVFFKVGLITIIGLSAKNAILIIEFAKDLYDQGEDLVTA 956

Query: 961  ALQACRMRLRPIIMTSLAFILGVVPLAVASGAGAGSKHAIGTGVIGGMLTAAVLAIFWIP 1020
             L+A R+RLRPIIMTSLAFILGVVPLA+A+GA + S+ AIGTGVIGGM+T A LA+ ++P
Sbjct: 957  TLKAARLRLRPIIMTSLAFILGVVPLAIATGASSASQQAIGTGVIGGMIT-ATLAVVFVP 1015

Query: 1021 LFYVMI 1026
            +F+V++
Sbjct: 1016 VFFVVV 1021