Pairwise Alignments

Query, 380 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

Subject, 397 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score =  357 bits (915), Expect = e-103
 Identities = 199/385 (51%), Positives = 260/385 (67%), Gaps = 19/385 (4%)

Query: 9   ALMSILAMAVFLAGCQEEAAPPAQQK---PKVGIVTLQAEPFAVTTELPGRTRAYRIAEV 65
           A M +L+  + L GC  +A+    Q+   P+VGI+T++++   + TELPGRT AYRIAEV
Sbjct: 11  AAMLMLSGGLVLTGCDNKASQGGAQQGGAPEVGIITIKSQTLNIITELPGRTSAYRIAEV 70

Query: 66  RPQVNGIIQKRLFTEGSDVKAGQQLYQIDASVYEATLKSAQASVASSKSLAD-------R 118
           RPQVNGII KR F EGSDVKAG  LYQID + Y+A   +A+A++  +++ A+       R
Sbjct: 71  RPQVNGIILKRNFVEGSDVKAGTSLYQIDPATYQAQYNNAKAALVQAQANAEIAQLTVNR 130

Query: 119 YAELVKDQAVSKQAYDEARAASLQAEA-------ELERARIDVRYTKVLAPISGRVGRSA 171
           Y  L+    VSKQ YD+A A + Q EA        L+ A+I + YT+V API+GRVG+S 
Sbjct: 131 YKPLLGTNYVSKQDYDQAVATARQTEAAVAAAKASLDNAQISLNYTRVTAPITGRVGKST 190

Query: 172 VTEGALVSNGQAQELATIQQLDPIYVDVTQPARDLLALRRDLAEGRLQKSGDNAAKVTLK 231
           VTEGALVSN QA  + TIQQLDPIYVDVTQ   D L L+++L  G LQ++ +  A V L 
Sbjct: 191 VTEGALVSNAQATAMTTIQQLDPIYVDVTQSTNDFLRLKKELESGTLQQT-NGKANVQLT 249

Query: 232 LEDGSDYAHEGKLEFSEVTVDAGTGSVTLRAVFPNPDKDLLPGMFVHAQLVAGMKSEAIL 291
           L+ G+ Y+  G LEFS+VTVD  TGS+TLRAVFPNPD +LLPGMFV AQL +G+   AIL
Sbjct: 250 LDSGTRYSQAGTLEFSDVTVDETTGSITLRAVFPNPDHNLLPGMFVRAQLDSGVTPNAIL 309

Query: 292 VPQQGVTRNTKGDPTAMVVNAESKVEVRPIKTERAVGNRWLVGEGLQPGDRVITEGLQFI 351
           VPQQGV+R  +GD T M+V    KVEV  I T +A+G++WLV  G++ GDR+I  GLQ I
Sbjct: 310 VPQQGVSRTPRGDATVMLVGEGDKVEVHSITTGQAIGDKWLVTSGVKSGDRIILTGLQKI 369

Query: 352 QPGVEVEAVPATNVDNRGGVPAQPQ 376
           +PG++V+A  A    N      QPQ
Sbjct: 370 RPGMQVKAQEAA-AGNAQQQQPQPQ 393