Pairwise Alignments

Query, 238 a.a., RNA methyltransferase, RsmE family from Pseudomonas stutzeri RCH2

Subject, 246 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Paraburkholderia sabiae LMG 24235

 Score =  161 bits (408), Expect = 1e-44
 Identities = 97/246 (39%), Positives = 136/246 (55%), Gaps = 14/246 (5%)

Query: 3   LSRFFIDAPLSLGQH-PLPEASAHYIGRVLRLTAGSAVQLFDGSGDEFRGELLEVGKKTV 61
           + RFF+  P        LP+    ++ RVLRL  G  V LF+G+G E+  E++++ +   
Sbjct: 1   MPRFFVGTPFKTDDIVSLPDEVNRHV-RVLRLQPGDTVSLFNGNGGEYGAEIVDMDRHGT 59

Query: 62  TVELHEHLKGMPESALQIHLGQGLSRGERMDWAIQKATELGVAQITPIISERCEVRLNDE 121
            V + E      E   Q+ L QG++  ++MDW I+KATELG  +  P+ + R  VRL  E
Sbjct: 60  IVRIGEFRDIEAEPPYQLTLAQGIAGSDKMDWLIEKATELGACEFVPLTTTRSVVRLAGE 119

Query: 122 RADKRLAHWRQIAISACEQCGRSVLPIIHAPVSLRDWLA------VEAELKLVLHPIAE- 174
           RA +R  HW++I  ++CEQCGR+ LP +     L  WL+      V+ EL+L+L P A  
Sbjct: 120 RAQRRQVHWQRIVQASCEQCGRNRLPEVMPTRELATWLSSMPKDPVDGELRLLLSPRASV 179

Query: 175 PLAS----HAKPRTLAFLIGPEGGLSENEVEQAAVQGFLPARLGPRVLRTETAPVVALSV 230
           P ++      K R L  L+GPEGG S  E   AA  GF+   LGPRVLRTETA +  LS 
Sbjct: 180 PFSALPTEPPKVRALV-LVGPEGGFSAAEEAAAASHGFMAVGLGPRVLRTETAGIAVLSA 238

Query: 231 AQQLWG 236
               WG
Sbjct: 239 LAARWG 244